Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme74058g00001 ATGTGTAGTAGAGGTCATTGGAGACCATCTGAGGATGAGAAGCTTAGAGAGTTGGTGGAAAGCTATGGACCTCATAATTGGAACGCCATAGCTGAAAATCTACGAGGAAGATCAG 115 0.4435 MCSRGHWRPSEDEKLRELVESYGPHNWNAIAENLRGRS 38
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme74058g00001 38 SUPERFAMILY Homeodomain-like 3 38 IPR009057 -
Trme74058g00001 38 ProSiteProfiles Myb-like domain profile. 1 38 IPR001005 -
Trme74058g00001 38 Gene3D - 4 38 - -
Trme74058g00001 38 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 38 IPR017930 -
Trme74058g00001 38 CDD SANT 7 38 IPR001005 -
Trme74058g00001 38 Pfam Myb-like DNA-binding domain 4 38 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme74058g00001 1 38 MYB Transcription Factor Family AT1G17950 84.211 2.01e-19 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trme74058g00001 Myb_DNA-binding 4.5e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme74058g00001 K09422 - gmx:100785170 81.6481