Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme73988g00001 AACAGAGGACCAGGAAGAACCCCACTGGATTGGACCACAAGGCTCAAGATAGCAGCTGGAGCTGCAAAAGGAGTAACTTTCATTCACAACTCGTGCAAATCCCTTAAACTCACTCATGGTAACATTAAATCCACCAACATACTCCTTGACAAGCAAGGAAATGCACGAGTATCGGATTTTGGGCTTTCAATTTTCAACGGTCCAAGCCAGTCAGGAGCTGGTAGCAGACCAAACGGCTACCGTGCTCCTGAGGTTTTAGACGGTCGAAAACAATCCCAAAAATCTGATGTGTACTCTTTCGGTGTTCTGTTG 312 0.4615 NRGPGRTPLDWTTRLKIAAGAAKGVTFIHNSCKSLKLTHGNIKSTNILLDKQGNARVSDFGLSIFNGPSQSGAGSRPNGYRAPEVLDGRKQSQKSDVYSFGVLL 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme73988g00001 104 Gene3D Transferase(Phosphotransferase) domain 1 3 104 - -
Trme73988g00001 104 MobiDBLite consensus disorder prediction 67 92 - -
Trme73988g00001 104 ProSiteProfiles Protein kinase domain profile. 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme73988g00001 104 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 104 IPR046959 -
Trme73988g00001 104 Pfam Protein kinase domain 16 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme73988g00001 104 SUPERFAMILY Protein kinase-like (PK-like) 7 104 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme73988g00001 Trme-Chr73988 492 803 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme73988g00001 1 104 Receptor kinase-like Gene Family AT1G68400 80.769 2.46e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trme73988g00001 Pkinase 8.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme73988g00001 - - cam:105851082 184.496