Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme739829g00001 ATGAGGAGATTCGTTGTTCGTGCTAGTTACTTGAATCATCCGATCTTCAAGAAGCTTCTGATGCAAGCGGAGGAAGAATACGGTTTTTGTAACCATGGACCACTTGCGATTCCCTGTGATGAGTCTTTGTTTGAAGAG 138 0.4348 MRRFVVRASYLNHPIFKKLLMQAEEEYGFCNHGPLAIPCDESLFEE 46
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme739829g00001 46 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 46 IPR003676 GO:0009733
Trme739829g00001 46 Pfam Auxin responsive protein 1 46 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme739829g00001 Trme-Chr739829 32 169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme739829g00001 2 46 Calmodulin-binding Proteins AT4G34750 77.778 3.53e-22 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme739829g00001 K14488 - msin:131243447 91.6633