Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme73797g00001 ATGAAAGTTCCAATGGAGGAAAARCCATTCCYTGCATGGTCATGGTCTGTTGAGCAGTGTTTGAAAGAGTACAGTGTGAAACTAGACAAGGGTTTGAGTTCTTCTGAGGTTCAGAAGCGGCGCGAGAAGTATGGTTGGAATGAGTTAGCAAAAGAAAAGGGAAAGCCATTATGGAAACTAGTGTTAGAACAATTTGATGACATGTTGGTGAAGATACTTTTGGTTGCCGCCTTTGTATCGTTTCTTTTGGCATACATTGAAGGAAGTGAATCGGGCGAGTCTGGATTTGAAGCTTATGTAGAGCCACTTGTGATCATTTTGATTTTAGTCCTTAACGCAATTGTCGGAGTATGGCAAGAGAATAATGCTGAAAAGGCTCTTGAAGCTCTAAAAGAGTTGCAATGTGAATCTATTAAAGTGTTAAGGGATGGATATTTTGTTCCTGACTTGCCT 453 0.4018 MKVPMEEKPFXAWSWSVEQCLKEYSVKLDKGLSSSEVQKRREKYGWNELAKEKGKPLWKLVLEQFDDMLVKILLVAAFVSFLLAYIEGSESGESGFEAYVEPLVIILILVLNAIVGVWQENNAEKALEALKELQCESIKVLRDGYFVPDLP 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme73797g00001 151 SMART Cation_ATPase_N_a_2 11 85 IPR004014 -
Trme73797g00001 151 Gene3D - 63 143 - -
Trme73797g00001 151 Pfam Cation transporter/ATPase, N-terminus 13 80 IPR004014 -
Trme73797g00001 151 PANTHER CALCIUM-TRANSPORTING ATPASE 17 145 - -
Trme73797g00001 151 SUPERFAMILY Calcium ATPase, transmembrane domain M 12 135 IPR023298 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme73797g00001 6 151 Primary Pumps ATPases(2) AT4G00900 74.658 2.13e-71 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme73797g00001 K01537 - gmx:100792952 259.225