Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme73736g00001 ATGAAGATGAATCGGTTGGGACAAGTTAGGCATTGTAAGATTGGTGAGAAGCAGTTTCGGATGGAGATGAATCGGTTGGGACAAGTTAGGCATCCGAATTTGGCGCCTTTGTTGGGGTATTGTGTTGTGGAAGAGGAGAAGCTTTTGGTTTATAAGCATATGTCGAATGGGACGCTTTTTTCGCTGTTGCATAAGAATAGTGGTGCGTTGGATTGGTTGATGAGGTTTAGGATAGGGTTGGGTGCGGCTAGGGGACTTGCGTGGTTGCATCATGGTTGTCATCCTCCGATTATACAACAGAATATTTGTTCTAATGTGATTCTTGTGGATGAAGAATTTGATGCTCGGATAATGGACTTTGGACTCGCCAGGCTTATGACGTCTGATGCCAATGGTAGTTTTGTGAACGGCGATTTGGGGGAACTTGGTTATATAGCTCCTGAGTATTCAAGTACGATGGTTGCTTCGTTGAAAGGGGATGTGTATGGATTCGGTGTTTTGCTTTTGGAGTTGGTCACCGGGTACAAACCTCTCGAGGTGAACCACGGCGATGAAGAGTTTAAGGGTAACTTGGTGGATTGGGTTAATGTGCATTCTAGTTCAGGTAGACTCAAGGATTGCATCGATAAGGCGATCAGTGGAAAAGGTAACGATGAGGAGATTCTGCAGTTTCTGAAAATCGCATCGAATTGTGTGATTACTCGCCCGAAAGATAG 716 0.4483 MKMNRLGQVRHCKIGEKQFRMEMNRLGQVRHPNLAPLLGYCVVEEEKLLVYKHMSNGTLFSLLHKNSGALDWLMRFRIGLGAARGLAWLHHGCHPPIIQQNICSNVILVDEEFDARIMDFGLARLMTSDANGSFVNGDLGELGYIAPEYSSTMVASLKGDVYGFGVLLLELVTGYKPLEVNHGDEEFKGNLVDWVNVHSSSGRLKDCIDKAISGKGNDEEILQFLKIASNCVITRPKD 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme73736g00001 238 Pfam Protein tyrosine and serine/threonine kinase 16 179 IPR001245 GO:0004672|GO:0006468
Trme73736g00001 238 ProSiteProfiles Protein kinase domain profile. 1 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme73736g00001 238 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 10 237 - -
Trme73736g00001 238 Gene3D Transferase(Phosphotransferase) domain 1 54 238 - -
Trme73736g00001 238 Gene3D Phosphorylase Kinase; domain 1 2 53 - -
Trme73736g00001 238 SUPERFAMILY Protein kinase-like (PK-like) 15 236 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme73736g00001 Trme-Chr73736 29 744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme73736g00001 8 238 Receptor kinase-like Gene Family AT1G27190 67.797 1.18e-109 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Trme73736g00001 PK_Tyr_Ser-Thr 2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme73736g00001 - - lja:Lj2g3v1022590.1 423.32