Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme73655g00001 | ATGTATGCTATCGGAGGAAGTGCTAATCCAACAATTAACAGTCAAGGAAACAGATTTGTTGCTCCTAATAACAGATTCAGCAAAGAGGTGACAAAGTATGAAGATGCAGCTGAGAGTCAATGGAAGCATTGGAATTGGAGATCAGAAGGAGACTTAATGGTAAATGGTGCATTTTTCACTGCATCAGGTGGTGGAGCTTCATCTAGCTATGCAAGAGCTTCAAGCTTAAGTGCAAGACCATCTTCCCTTGTCGGTTCCATAACAATAGCAGCTG | 274 | 0.4197 | MYAIGGSANPTINSQGNRFVAPNNRFSKEVTKYEDAAESQWKHWNWRSEGDLMVNGAFFTASGGGASSSYARASSLSARPSSLVGSITIAA | 91 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme73655g00001 | 91 | PRINTS | Pollen allergen Amb family signature | 73 | 91 | IPR018082 | - | |
Trme73655g00001 | 91 | PRINTS | Pollen allergen Amb family signature | 44 | 68 | IPR018082 | - | |
Trme73655g00001 | 91 | PRINTS | Pollen allergen Amb family signature | 2 | 21 | IPR018082 | - | |
Trme73655g00001 | 91 | SUPERFAMILY | Pectin lyase-like | 1 | 84 | IPR011050 | - | |
Trme73655g00001 | 91 | Gene3D | - | 1 | 91 | IPR012334 | - | |
Trme73655g00001 | 91 | PANTHER | PECTATE LYASE 18-RELATED | 1 | 89 | IPR045032 | GO:0030570 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme73655g00001 | Trme-Chr73655 | 58 | 583 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme73655g00001 | 1 | 88 | Polysaccharide Lyase | AT4G24780 | 81.818 | 1.56e-40 | 135 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme73655g00001 | K01728 | - | csav:115709412 | 141.739 |