Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7360g00001 ATGGTTGGTGCACTCGAGGATAAGAGAAAGCTGGTTTTGCAGGGAATACTTGGGGTTCAAAAATGCGTTCGTGGTCATCAAGCTCGCAGTCATTTCAATAAACTTAAGAATGGAGTGACCATTTTACAATCATTTGTTCGTGGAGAAATTGCAAGAAGGAAATATGGTGTTATGGTGAAGTCTTCTATAACTATTTCTTCTGAAAATATCGAGGAGATACAGGCTATCATAACACTACAATCTGTAATTCGTGGATGGTTGGTTCGAAAGCATAATAGTAGCTTGAATAAGCTTAAGAAACATCCCGAGAATGGAAAATCTAGGCGAAGGTCACGTTTGAAGATGTCATTCGACAAGCAAAAAGAAGAGGAAAATGCTGAGTTGAGGGAACAGCTAAAACAATTTGAGAAAAGGTGGATTGAATACGAGAAAAAGATGAAAACAATGGAGGAAATGTGGCAAAGACAAATGGCATCTTTGCAAATGAGTCTTGCTGCTGCTAAAACCAGCCTTGCTTCTGAGAATGCCAATGGTCAACCTTCAAGACATGATGTATCATTACCATCGAATTTCTGTTATGATTCCGAGGAAGCTATTTCGATGGGATCTCGAACGCCTCGAACACCCGGTTGCAGCACACCTTTGAAGTATTCTAGTAGTCTATCTGAAGTCAGAGCAGCGAGAGACGGTAACGGTGCAATTAACAATCTGATGAAAGAGTTCGAGCAGCGCAGACAGACATTCGATGAGGATGCAAGAG 760 0.4105 MVGALEDKRKLVLQGILGVQKCVRGHQARSHFNKLKNGVTILQSFVRGEIARRKYGVMVKSSITISSENIEEIQAIITLQSVIRGWLVRKHNSSLNKLKKHPENGKSRRRSRLKMSFDKQKEEENAELREQLKQFEKRWIEYEKKMKTMEEMWQRQMASLQMSLAAAKTSLASENANGQPSRHDVSLPSNFCYDSEEAISMGSRTPRTPGCSTPLKYSSSLSEVRAARDGNGAINNLMKEFEQRRQTFDEDAR 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7360g00001 253 Coils Coil 118 152 - -
Trme7360g00001 253 PANTHER MYOSIN 2 198 - -
Trme7360g00001 253 Gene3D - 16 63 - -
Trme7360g00001 253 SMART iq_5 71 93 IPR000048 GO:0005515
Trme7360g00001 253 SMART iq_5 11 33 IPR000048 GO:0005515
Trme7360g00001 253 SMART iq_5 34 56 IPR000048 GO:0005515
Trme7360g00001 253 MobiDBLite consensus disorder prediction 109 124 - -
Trme7360g00001 253 MobiDBLite consensus disorder prediction 96 124 - -
Trme7360g00001 253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 93 IPR027417 -
Trme7360g00001 253 Pfam IQ calmodulin-binding motif 74 91 IPR000048 GO:0005515
Trme7360g00001 253 Pfam IQ calmodulin-binding motif 39 55 IPR000048 GO:0005515
Trme7360g00001 253 Pfam IQ calmodulin-binding motif 16 32 IPR000048 GO:0005515
Trme7360g00001 253 ProSiteProfiles IQ motif profile. 35 64 IPR000048 GO:0005515
Trme7360g00001 253 ProSiteProfiles IQ motif profile. 72 101 IPR000048 GO:0005515
Trme7360g00001 253 ProSiteProfiles IQ motif profile. 14 40 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7360g00001 Trme-Chr7360 1 1881 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7360g00001 2 253 Myosins gene family AT5G54280 44.097 1.47e-63 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7360g00001 K10357 - gmx:100801876 342.043