Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7357g00001 ATGTTGTATATTGCAAATGCTGGAGATTCAAGAGCGGTGTTAGGAAGAGGGAGGAGGGGAACAAGAGAAACATTAGCTGTTCAGTTATCTGTAGAACACAATGTGAACATAGAAACTGAGAGAGACGATGTTCGGTCAAAGCACCCCTATGATTCACAGATTGTGGTTATGAAACACTCAGTTTGGCGTGTCAAGGGCATCATACAGGTTTCAAGATCCATAGGTGATGCATATCTAAAGAAAGCAGAATTTAACAGGGAGCCTCTGCCACTTAAGTTCCGATTACCTGATACCTTTTTCAAGCCAATTCTTAGTAGCGAGCCATCGATATCAGTTCATAAAATCCAACCTGAAGATAAATTCCTCATCTTAGCTTCTGATGGTTTATGGGAGCATCTTAGCAACCAAACAGCTGTCAATATCGTTAGCAATAGTCCGCGCAATGGAATAGCGAGGAGACTTGTGAAAGCCGCAATGAGAGAAGCAGCTAAGAAAAGAGAAATAAGATTCTCAGACCTCCAAAAGATTGAACAAGGAGTGAGGAGACATTTCCATGATGATATTACAGTAATTGTTGTATATCTAAATCCTAAACTGATTGATAATAGCTCTCAATGTATTTCACCTCTTTCGATCAAAGACCGTAGGCATGTCAATTCTTAG 663 0.4012 MLYIANAGDSRAVLGRGRRGTRETLAVQLSVEHNVNIETERDDVRSKHPYDSQIVVMKHSVWRVKGIIQVSRSIGDAYLKKAEFNREPLPLKFRLPDTFFKPILSSEPSISVHKIQPEDKFLILASDGLWEHLSNQTAVNIVSNSPRNGIARRLVKAAMREAAKKREIRFSDLQKIEQGVRRHFHDDITVIVVYLNPKLIDNSSQCISPLSIKDRRHVNS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7357g00001 220 PANTHER PROTEIN PHOSPHATASE 2 194 IPR015655 GO:0004722|GO:0006470
Trme7357g00001 220 ProSiteProfiles PPM-type phosphatase domain profile. 1 195 IPR001932 -
Trme7357g00001 220 SUPERFAMILY PP2C-like 2 196 IPR036457 -
Trme7357g00001 220 Gene3D - 1 206 IPR036457 -
Trme7357g00001 220 CDD PP2Cc 1 195 IPR001932 -
Trme7357g00001 220 SMART PP2C_4 1 193 IPR001932 -
Trme7357g00001 220 Pfam Protein phosphatase 2C 2 164 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7357g00001 Trme-Chr7357 406 1761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7357g00001 1 204 PP2C-type Phosphatase Gene Family AT3G12620 70.588 1.03e-103 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7357g00001 K01102 - gmx:100791448 336.65