Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme73543g00001 ATGGATGTTGAAAGGTATCAAGAAGCACTTCATAGGTCTTCACTGATGAAGGATCTTGAGTTGTTTCCATATGGTGATCTAACCGAGATAGGAGAGAGAGGTGTAAATCTAAGCGGGGGTCAAAAGCAGCGAATTCAACTTGCTCGAGCTTTTTATCAGAATGCCGACATATATCTCTTGGATGATCCATTCAGTGCTGTTGACGCGCACACTGCCACTAATTTGTTCAATGAATACATATTGGAAGGACTTTCCGGAAAGACAGTCCTTCTTGTGACACATCAAGTTGACTTTCTCCCTGCATTTGATTCTGTTTTGTTGATGTCAAATGGAAAAATCCTTCAAGCTGCTCCTTACCATGATTTACTGATATCTAGCCGAGAATTTACAGACCTTGTCAATGCTCACAAAGAGACTGCTGGTTCCGGTCGACTTTTAGAAGTTACTTCATCGCAAAGACATGCAAGTTCTGATAGAGAGATTAAGAAAACTTTCACGGAGAAGCCGTTTAAAGCTTTAAACGGAGA 527 0.4099 MDVERYQEALHRSSLMKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARAFYQNADIYLLDDPFSAVDAHTATNLFNEYILEGLSGKTVLLVTHQVDFLPAFDSVLLMSNGKILQAAPYHDLLISSREFTDLVNAHKETAGSGRLLEVTSSQRHASSDREIKKTFTEKPFKALNG 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme73543g00001 175 Gene3D - 1 158 IPR027417 -
Trme73543g00001 175 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 153 - -
Trme73543g00001 175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 135 IPR027417 -
Trme73543g00001 175 Pfam ABC transporter 28 64 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme73543g00001 Trme-Chr73543 1 747 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme73543g00001 22 128 Calmodulin-binding Proteins AT2G36910 38.318 7.38e-15 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme73543g00001 K05666 - lja:Lj0g3v0317109.3 294.664