Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme735359g00001 CAAGAGCTTGAAGATGAGATTGAGCGATGGATTAAGGCCTCTAACGTCGCTCTCAAAATCCCAAGCGAGCGGCGTCTCTGCCATCGTGTCTTCTCCGGTTTGTCTTCATCATCGGCAGCCTCTGATCTTTCCTTCATGGAAGTCTGTCGTGGTTCAGTGATTCAGTTGCTGAATTTCGCCGATGCTGTAGCCATAG 196 0.5 QELEDEIERWIKASNVALKIPSERRLCHRVFSGLSSSSAASDLSFMEVCRGSVIQLLNFADAVAI 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme735359g00001 65 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 64 IPR004140 GO:0000145|GO:0006887
Trme735359g00001 65 Gene3D Exocyst complex component Exo70 1 65 - -
Trme735359g00001 65 Pfam Exo70 exocyst complex subunit 8 64 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trme735359g00001 65 SUPERFAMILY Cullin repeat-like 2 64 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme735359g00001 Trme-Chr735359 50 245 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme735359g00001 1 65 EXO70 exocyst subunit family AT5G58430 79.104 2.08e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme735359g00001 K07195 - thj:104799384 96.2857