Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme735288g00001 GGTGCAGCTGTTCATGCTGCTATTTTGAGTGAAGGCTTTAAGAATGTCCCGAACTTGGTGCTACGAGATGTTACCCCATTGTCACTTGGTATCGAAGCAAATGTTGGTCATGTCATGAGTGTGGTGATTCCTAGGAACACTCCTGTGCCTGTCAAGATGACAAAACCATTTTCTACCCTTATAGATAATCAGTCCATAGCCCTGTTTCCTGTTTACGAGGGTGAGAGAGCAAAAGCTAGTGACAAT 246 0.4431 GAAVHAAILSEGFKNVPNLVLRDVTPLSLGIEANVGHVMSVVIPRNTPVPVKMTKPFSTLIDNQSIALFPVYEGERAKASDN 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme735288g00001 82 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 15 82 IPR029047 -
Trme735288g00001 82 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 7 82 IPR029047 -
Trme735288g00001 82 PANTHER HEAT SHOCK PROTEIN 70KDA 1 82 IPR013126 GO:0005524|GO:0140662
Trme735288g00001 82 Pfam Hsp70 protein 1 82 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme735288g00001 Trme-Chr735288 2 247 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme735288g00001 1 82 Calmodulin-binding Proteins AT1G16030 59.036 2.90e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme735288g00001 K03283 - gmx:102667572 105.531