Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7345g00001 ATGGACCTCGAATCCACCAAAATGTTGAAACACTCCGGTCGCCATTCACCGCCGCCGGAGTCGTTCGCCGACAAGATCTACCAATTCCGCGGCGCCTTTCTAATGGTGGCACTCCCTCTCCTCCTCGTCACACTCATACTTTACGTCATGCCTTCCACCTCTTCCAATGAATCCATCGAAGATTACGCCCTAACGCACCGTAAAATTTCTCCCGATCGTATACCGTCGGATTCTTTTGCCGTCATTTTCGACGCTGGTAGCTCCGGTAGCCGCGTTCACGTCTTTCGATTTGATCGGAACCTTGATCTCGTTCACATTGGTAAAGATCTTGAGGTTTTCTTGCAGGTATATGATAATGATGTACTGGCATCTCCAATGCAAGGAGATTAA 390 0.4897 MDLESTKMLKHSGRHSPPPESFADKIYQFRGAFLMVALPLLLVTLILYVMPSTSSNESIEDYALTHRKISPDRIPSDSFAVIFDAGSSGSRVHVFRFDRNLDLVHIGKDLEVFLQVYDNDVLASPMQGD 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7345g00001 129 Pfam GDA1/CD39 (nucleoside phosphatase) family 76 111 IPR000407 GO:0016787
Trme7345g00001 129 Gene3D - 64 121 - -
Trme7345g00001 129 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 23 104 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7345g00001 Trme-Chr7345 933 1615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7345g00001 13 120 Calmodulin-binding Proteins AT3G04080 47.826 1.16e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7345g00001 K14641 - pvu:PHAVU_004G077600g 164.851