Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme73436g00001 GCACTTGGCAAAGCGTCCGGAGAGAACATAGGCTCACAAGAAAGCTCTATTAATCAAGACAAGAAGACCTCAGAATATGGAAGTGTGAAGAACAGTTCGGTTTCTGCCAAAGCTAGCGACGGGGCCAGCAGTATTGCAAAGACAAGTGGTAGTGCTAAGATCAGTGACCGAGCTGATTTTGTTGAGAGTGGTAAGAGCAGTATTTGCCGAGGAAGTACAAGCAGTGATGTGATGGACAAAGGGTCGTTAGCAAGTCGTAAGAAGTTACTTCGTGCTCAGACGGAACGGGAAATTCTTCAGTCACTTGACCACCCGTTTCTCCCAACTTTGTACACTCATTTTGAGACGGAGAAGTTTTCATGCTTGGTGATGGAATTCTGCCCGGGTGGAGACCTCCATACTCTTAGGCAGAAACAACCAGGGAAGCACTTTCCTGAGCAGGCAGTAAA 449 0.4722 ALGKASGENIGSQESSINQDKKTSEYGSVKNSSVSAKASDGASSIAKTSGSAKISDRADFVESGKSSICRGSTSSDVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAV 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme73436g00001 149 Gene3D Phosphorylase Kinase; domain 1 76 149 - -
Trme73436g00001 149 MobiDBLite consensus disorder prediction 8 51 - -
Trme73436g00001 149 MobiDBLite consensus disorder prediction 1 82 - -
Trme73436g00001 149 SUPERFAMILY Protein kinase-like (PK-like) 78 147 IPR011009 -
Trme73436g00001 149 PANTHER FLIPPASE KINASE 1-RELATED 75 149 - -
Trme73436g00001 149 ProSiteProfiles Protein kinase domain profile. 1 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme73436g00001 149 MobiDBLite consensus disorder prediction 66 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme73436g00001 Trme-Chr73436 142 806 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme73436g00001 20 77 AGC Kinase Gene Family AT5G47750 77.586 8.04e-21 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trme73436g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme73436g00001 K08286 - gmx:100798088 181.8