Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7335g00001 ATGCCTAATCTTGAAAAGCTGGTATTCAAAGATTGTCCAAGTTTGTCTACAGTCTGCCATAGCATTGCATCTCTACATACACTTCTTCTGCTAAATTTGACAGACTGCACAGGTCTTCAGACACTTCCAAGAAGCATCTATAAATTAAAGTCTCTAGAAACTTTGATTCTTTCAGGATGCTCCAAGATTGACAAATTGGAGGAGGATTTGGAACAAATGGAATCATTGATTACCTTGATTGCGGATAAGACTGCTATAACCAAAGTGCCATTTTCAATAGTAAGATTGAAAAGCATTGGATATATTTCTTTAAGTGGCTTTAAAGGATTTTCTCGTGATGTATTCCCTTCTCTCATTCAGTCTTGGATGTCGCCATCAAGTAATGTGATATCCCTAGTTCAAACATCTGTGTCCATGTCATCACTTGGTACTTCCAAGGAGCTTCAAAAACTTCGAATTCTTTGTGTAGAGTGTGGTTCAGATCTACAACTAACTCTAGATGTAGCAAGATTTTTGGATGTATTAAAAGCCACAAATTGTCAGAACTTGGAAGCAAGTGCAAGTTCAACTACATCAGAGATCTCTAAAATGTATGCTTCTCCCTTAATTGACGATTGCCTGGGTCAAGTTTGCACTTCAGGGTCAAAGAGTCACCTGAAATCTCTCTTAATTCAAATGGGAACAAAATGCCACATCTCCAATATTGCTGAAGACAGTGTTTTACAGGTTTGGATATCTCATCCGCATATCTAG 753 0.3785 MPNLEKLVFKDCPSLSTVCHSIASLHTLLLLNLTDCTGLQTLPRSIYKLKSLETLILSGCSKIDKLEEDLEQMESLITLIADKTAITKVPFSIVRLKSIGYISLSGFKGFSRDVFPSLIQSWMSPSSNVISLVQTSVSMSSLGTSKELQKLRILCVECGSDLQLTLDVARFLDVLKATNCQNLEASASSTTSEISKMYASPLIDDCLGQVCTSGSKSHLKSLLIQMGTKCHISNIAEDSVLQVWISHPHI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7335g00001 250 SUPERFAMILY RNI-like 1 184 - -
Trme7335g00001 250 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 3 189 - -
Trme7335g00001 250 Gene3D Ribonuclease Inhibitor 1 238 IPR032675 -
Trme7335g00001 250 Coils Coil 63 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7335g00001 Trme-Chr7335 511 1263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7335g00001 2 99 WRKY Transcription Factor Family AT4G12020 35.714 6.54e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7335g00001 - - mtr:11422497 371.318