Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme73337g00001 ATGGAGGGAGGAGATGATCTCCACCACCATCATCACCACCACCACCACCAGCATCTCCACCATCAACAGCATCAGCAGCAGCANNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNAAAAAAGAAGATAATCAAGAAGCAGCATCATGCTCAACTTCATCACCATATCCATCCTTAGCAATCTCACCAATCTCACCAACAGAACCAAGTACATCAAATTCAAACCGATCCAACCAACTGGTATCGGCTTCAGCACCAACAACCTCGGACCCCGGAAACAAAAAGCCGCCACCAAAACGAACCTCCACTAAAGACCGTCATACCAAAGTAGAAGGCCGTGGCCGCCGTATAAGAATGCCGGCACTCTGTGCCGCTCGAGTTTTTCAACTAACACGCGAACTAGGCCATAAATCAGACGGTGAAACCATTGAATGGCTCCTCCAACAAGCCGAACCAGCTGTTATAGCAGCAACTGGTACCGGAACTATTCCTGCTAACTTCACTTCCCTCAACATCTCTCTCCGTAGCTCAGGCTCTTCCATGTCTGTTCCATCTCAGCTTAGATCTTCTTACTTCAACCCGAATTTCTCACTTCAACAACGCAGAACACTTTTTCCTGGAATTGGTTTATCATCTTCAGATAACAGCAACA 661 0.4418 MEGGDDLHHHHHHHHHQHLHHQQHQQQXXXXXXXXXXXXXXXKKEDNQEAASCSTSSPYPSLAISPISPTEPSTSNSNRSNQLVSASAPTTSDPGNKKPPPKRTSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSYFNPNFSLQQRRTLFPGIGLSSSDNSN 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme73337g00001 220 ProSiteProfiles TCP domain profile. 106 160 IPR017887 -
Trme73337g00001 220 Coils Coil 21 27 - -
Trme73337g00001 220 Pfam TCP family transcription factor 104 194 IPR017887 -
Trme73337g00001 220 Coils Coil 43 49 - -
Trme73337g00001 220 MobiDBLite consensus disorder prediction 1 119 - -
Trme73337g00001 220 MobiDBLite consensus disorder prediction 48 99 - -
Trme73337g00001 220 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 31 198 IPR005333 GO:0003700
Trme73337g00001 220 MobiDBLite consensus disorder prediction 100 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme73337g00001 Trme-Chr73337 1 661 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme73337g00001 90 175 TCP Transcription Factor Family AT1G69690 93.182 8.58e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trme73337g00001 TCP 8.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme73337g00001 - - vvo:131635423 306.605