Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme73284g00001 TTCAAGTACGAGAAAGACTCAGTGATGGTGGTGAGTGAAGAAGAATATGAAAGATGCAAATCCGCTCGTCCACTCTTTTTCGGCAACAATGGCGATACAGTTTTCAAATTTGAGCGACCGGGATTGTTCTACTTCATTAGTGGTGTTAGTGGTCATTGTACAAGAGGACAGAAAATGATCATCAAGGTTTTGGACATTGAACCAGAAGAACAAGAACCAACAGCACCCTCACCACAATCTGCAAATGAGAATGCACCAACANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNACTCTTTGCTTTGTCATTTTTAGGCAGGATTTATGCTTGA 351 0.3533 FKYEKDSVMVVSEEEYERCKSARPLFFGNNGDTVFKFERPGLFYFISGVSGHCTRGQKMIIKVLDIEPEEQEPTAPSPQSANENAPTXXXXXXXXXXXXXXXXXLFALSFLGRIYA 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme73284g00001 116 Gene3D - 1 67 IPR008972 -
Trme73284g00001 116 PANTHER BLUE COPPER PROTEIN 1 76 IPR039391 GO:0009055
Trme73284g00001 116 Pfam Plastocyanin-like domain 1 57 IPR003245 GO:0009055
Trme73284g00001 116 MobiDBLite consensus disorder prediction 67 95 - -
Trme73284g00001 116 ProSiteProfiles Phytocyanin domain profile. 1 65 IPR003245 GO:0009055
Trme73284g00001 116 SUPERFAMILY Cupredoxins 1 64 IPR008972 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme73284g00001 1 64 Phytocyanin Superfamily AT3G18590 71.875 1.55e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme73284g00001 - - vvo:131604415 147.132