Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme73233g00001 CCAGGTGTTGCCATTCTTGCAGCATGGACCGGCACGCTTAATGATGGAAGTTTTGTTCCAAAAGGGAAAAAGCTCTCCCCGTATAACATTATATCAGGGACTTCCATGTCATGCCCCCATGTTTCAGGCCTTGCAGCCAGCATTAAATCTAGAAATCCAACTTGGAGTCCCTCTGCAATCAAATCAGCTATCATGACCTCTGCAACTCAAATTAACAATATGAAGGCTCCCATTACGACGGATTTAGGGTCAGTTGCCACACCTTATGACTATGGAGCAGGGGAAATAACAACAATTCAACCATTCCAACCAGGGCTAGTTTATGAAACCACTATCGTCGACTACTTGAACTACTTGTGTTACATAGGATACAATACAACTACTGTTAAAGTTATCTCAAAAACTGTCCCTCATAGTTTCCGTTGCCCGAAGGATTCGACTCCTGATCAAGCTTCCAACATCAATTACCCTTCCATAGCAATCACTAATTTCTCTAGTAAAGAAATTGTGAATGTGAGTAGAACTGTTACAAATGTAGGTGAAGAGAATGAAACAGTCTACTCTGCTATCGTCGATGCTCCCAACGGAGTGAAAGTCCAGTTGATTCCAGAGAAACTTCAATTCACAAAAAGTAGCAA 638 0.4185 PGVAILAAWTGTLNDGSFVPKGKKLSPYNIISGTSMSCPHVSGLAASIKSRNPTWSPSAIKSAIMTSATQINNMKAPITTDLGSVATPYDYGAGEITTIQPFQPGLVYETTIVDYLNYLCYIGYNTTTVKVISKTVPHSFRCPKDSTPDQASNINYPSIAITNFSSKEIVNVSRTVTNVGEENETVYSAIVDAPNGVKVQLIPEKLQFTKSS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme73233g00001 212 Pfam Subtilase family 26 94 IPR000209 GO:0006508|GO:0008236
Trme73233g00001 212 Gene3D Peptidase S8/S53 domain 1 115 IPR036852 GO:0004252|GO:0006508
Trme73233g00001 212 Gene3D - 119 212 - -
Trme73233g00001 212 ProSiteProfiles Serine proteases, subtilase domain profile. 1 103 - -
Trme73233g00001 212 Pfam Fibronectin type-III domain 153 210 IPR041469 -
Trme73233g00001 212 ProSitePatterns Serine proteases, subtilase family, serine active site. 33 43 IPR023828 -
Trme73233g00001 212 SUPERFAMILY Subtilisin-like 1 147 IPR036852 GO:0004252|GO:0006508
Trme73233g00001 212 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 209 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme73233g00001 Trme-Chr73233 54 807 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme73233g00001 1 210 Subtilisin-like Serine Gene Family AT1G20150 52.804 2.52e-71 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme73233g00001 K25898 - tpra:123898882 358.221