Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme73083g00001 ATGGAATTAAACTACAGAAGAAAGATTGCCACATTGTCTCGGATTAACCATAAGAACTTTGTTAATCTTATTGGATACTGTGAGGAAGAACAACCATTCTCAAGGATGTTTATATTAGAATATGCCCCAAATGGAAGTCTATTTGAACACCTACATGTTAAAGAAATTGAAGGTCTTGAATGGAATGAAAGAGTAAGGATCATAATGGGAACTGCCTATTGTCTTCAGTACATGCATCATGATTTGAATCCACCAATAGCTCATAGCAAAGTTAATTCGAAGTTTATCATGTTGACAGATGATTATGCTGCAAAG 315 0.346 MELNYRRKIATLSRINHKNFVNLIGYCEEEQPFSRMFILEYAPNGSLFEHLHVKEIEGLEWNERVRIIMGTAYCLQYMHHDLNPPIAHSKVNSKFIMLTDDYAAK 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme73083g00001 105 Gene3D Transferase(Phosphotransferase) domain 1 2 105 - -
Trme73083g00001 105 ProSiteProfiles Protein kinase domain profile. 1 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme73083g00001 105 SUPERFAMILY Protein kinase-like (PK-like) 5 105 IPR011009 -
Trme73083g00001 105 PANTHER PROTEIN MALE DISCOVERER 2 1 105 - -
Trme73083g00001 105 Pfam Protein tyrosine and serine/threonine kinase 7 103 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme73083g00001 Trme-Chr73083 20 591 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme73083g00001 5 105 Trihelix Transcription Factor Family AT1G23540 40.594 7.79e-24 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Trme73083g00001 PK_Tyr_Ser-Thr 2.5e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme73083g00001 - - adu:107468254 182.57