Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme73075g00001 ATGTCTAACTGCAAGGAAACAACAACAAATACTACTACAACTAACGCCGTCGAACCCACAACAAACCAAACCGTTAAAAAACCGCCGTCAAAAGACCGTCACAGCAAAGTTGACGGACGTGGAAGAAGAATACGCATGCCAATAATATGCGCCGCACGTGTTTTTCAGTTAACACGTGAGTTAGGTCATAAATCCGACGGTCAAACTATTGAATGGCTTCTCCGTCAAGCTGAACCGTCGATTATCGCCGCTACCGGTACCGGAACTACTCCTGCTTCTTTCTCTTCTCTTTCTGAGCATAAACCTTTTCTTCCTCCTTCTCCTTTCATTCTCGGTAAACGGTTAAGGTCTGAACATGATGAAGCTGTTTCTATTGCTGCACCGACTGCTCCGCCTGGTATATGGCGGCCGGATTTTGCTCAGCTTTGGAGTTTTGCTGCTGCTCAACCTCCGCCGGAAGTTCTTTCCATTTCTCCGCATCAGCAACAACATCAGCATAATTCGTTGTTTCATCATCAACAGCAGCAACAACAGCATAATCAGCACCAGCA 551 0.4628 MSNCKETTTNTTTTNAVEPTTNQTVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSLSEHKPFLPPSPFILGKRLRSEHDEAVSIAAPTAPPGIWRPDFAQLWSFAAAQPPPEVLSISPHQQQHQHNSLFHHQQQQQQHNQHQ 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme73075g00001 183 MobiDBLite consensus disorder prediction 1 26 - -
Trme73075g00001 183 MobiDBLite consensus disorder prediction 155 183 - -
Trme73075g00001 183 MobiDBLite consensus disorder prediction 27 41 - -
Trme73075g00001 183 MobiDBLite consensus disorder prediction 153 183 - -
Trme73075g00001 183 Coils Coil 172 183 - -
Trme73075g00001 183 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 22 160 IPR005333 GO:0003700
Trme73075g00001 183 Pfam TCP family transcription factor 30 160 IPR017887 -
Trme73075g00001 183 MobiDBLite consensus disorder prediction 1 41 - -
Trme73075g00001 183 ProSiteProfiles TCP domain profile. 30 84 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme73075g00001 Trme-Chr73075 258 808 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme73075g00001 17 148 TCP Transcription Factor Family AT5G23280 62.500 1.38e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trme73075g00001 TCP 9.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme73075g00001 K16221 - gmx:100795254 209.92