Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7303g00001 TTTCCCGATCTTAAAATTTTCAGATTGTTGAAGTTGAGTTATGATGGACTTGACGACGAACAACAGAATATATTTCTTGACATAGCTTGCTTCTATAGAGGAGAATTTGAGAAAGTTGTAGCACTAACATTGGATTCTTTTGGTTTCTCTGCTTGCAAAGGAATGGATGATCTCAAAGATAGGGGACTCATATCTATTTCAAAAGGTAGAGTTTGGATGCATGATCTAATACAAGAAATGGGGCATGAAATTGTTAGGCTTGAATGTGTCGATGATCCTGGAAAACGTAGTCGAATATGGAAGCTTAAAGATATTTATGAAGTTTTACGTAAGAACAAGGGAAAGTTAACTGAGGAAATCCAGTGTATATTCCTCGACATGGAGAAAATAGCGGCGGAAATGTGGGACATGAAGGAAATGATGGAAATAAAGAAAGTTCAACTACATGCTGAAACATTCAAGGAAATGCATAAACTTAGAATGATCAAGTTCCATACTGGATATTTGTGTGAATCACCTCTGACTTTTTATACTTTTCTCAAGAGTTTTCCTGATCATTTAAAATTTCTATGTTGGGATAAATTCCCTCAAAGATCTTTGCCGCAAGACTTTTGCCCAGAAAATCTTGTTATACTTGAGATGCCTAACAGTGATCTTGAACAACTTTGGGAAGGGGATCAGGCTTTACCAAATTTGAAAAGGCTCAACCTCACTGGTTCCCAGAAGCTGGTTCGAGTACCGGACCTCTCCTTATCTCCAAATATTGAAGAAATAATTCTTAATGGTTGTAGAAGTTTGATAGAAGTTTACTCCTCTACCTTCCTGGACAACCTTAACTGGTTATGGTTAGGTCATTGTAGCAAACTTGAGAGGTTAGATATTTGTAGCAATATTCTGTGGAGATCATCTGGAATAGTTAATCTCGATTGTTGTGACAAACTTGAAACGCTTTTAATCAGAGGTAGAACTGATGTGGTTCAATCATACATATATTCNGGACTGTGA 1005 0.3672 FPDLKIFRLLKLSYDGLDDEQQNIFLDIACFYRGEFEKVVALTLDSFGFSACKGMDDLKDRGLISISKGRVWMHDLIQEMGHEIVRLECVDDPGKRSRIWKLKDIYEVLRKNKGKLTEEIQCIFLDMEKIAAEMWDMKEMMEIKKVQLHAETFKEMHKLRMIKFHTGYLCESPLTFYTFLKSFPDHLKFLCWDKFPQRSLPQDFCPENLVILEMPNSDLEQLWEGDQALPNLKRLNLTGSQKLVRVPDLSLSPNIEEIILNGCRSLIEVYSSTFLDNLNWLWLGHCSKLERLDICSNILWRSSGIVNLDCCDKLETLLIRGRTDVVQSYIYSGL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7303g00001 334 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 316 IPR044974 GO:0006952
Trme7303g00001 334 SUPERFAMILY "Winged helix" DNA-binding domain 5 109 IPR036390 -
Trme7303g00001 334 Gene3D Ribonuclease Inhibitor 101 328 IPR032675 -
Trme7303g00001 334 Pfam Leucine Rich Repeat 208 227 IPR011713 -
Trme7303g00001 334 SUPERFAMILY L domain-like 146 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7303g00001 Trme-Chr7303 1 1566 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7303g00001 16 314 WRKY Transcription Factor Family AT4G12020 37.742 1.16e-43 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7303g00001 - - tpra:123916959 416.387