Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme730057g00001 ATGATTTTGATTTATGAGTTCATGCAGCATGGTACTCTATGCGAGTATCTATATGGTTCCAATAACAAGCCCCTATTGTGGAAGCAGAGGCTTGAGATCCTTCTGGGTGCAGCGAGAGGCCTGCATTATCTTCATGCTGAG 141 0.4468 MILIYEFMQHGTLCEYLYGSNNKPLLWKQRLEILLGAARGLHYLHAE 47
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme730057g00001 47 Pfam Protein tyrosine and serine/threonine kinase 2 46 IPR001245 GO:0004672|GO:0006468
Trme730057g00001 47 PANTHER OS07G0166700 PROTEIN 1 46 IPR045272 GO:0004714|GO:0006468
Trme730057g00001 47 Gene3D Transferase(Phosphotransferase) domain 1 1 47 - -
Trme730057g00001 47 SUPERFAMILY Protein kinase-like (PK-like) 2 45 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme730057g00001 Trme-Chr730057 71 211 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme730057g00001 1 46 Receptor kinase-like Gene Family AT2G23200 71.739 2.20e-18 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Trme730057g00001 PK_Tyr_Ser-Thr 2.1e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme730057g00001 - - mtr:25497555 93.9745