Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme72968g00001 ATGCTGAGAGATCACAATTGCAGAAATGTAGAGATTCGGCAAGAACTCGAATCATTACACGGGCACGACGATGCCATTTGCTCCAATGTCTTTGGAGAATGGCGTGTCAAAGGCTTAAGCGAGACAAGTAGATGTATAGGAAATGCATATTTGAAGAAAGCTGACTTTACTACAGAGAGAGACTTTGTAGCTGCACCAGGAGAAAAGGTGACGTCCATATTCACGGAACCAGTGCTATCAGCCGAACCAGAGTTTTATACAAGAGATTTAGATGGTACTGTAAAGTTCATTATATTTGGATCTGGTGGATTTTGGAAATTGTTGACAAATGAGGAGGCTGCTAAGATCGTTAGCGACCATCCGCGAGAAGGAATTGCAAAGAGGCTTGCAGCTCAGGCTGTAAAAGTTGCAGCTGAAAGATGGGGCCTAGCCTACAGGGAAGTGATGCTAGCCCCTAAGGGAGTGAAAATAAGCGGAAAACCATGTACTTCTTCTGAGCTAATTAA 506 0.4368 MLRDHNCRNVEIRQELESLHGHDDAICSNVFGEWRVKGLSETSRCIGNAYLKKADFTTERDFVAAPGEKVTSIFTEPVLSAEPEFYTRDLDGTVKFIIFGSGGFWKLLTNEEAAKIVSDHPREGIAKRLAAQAVKVAAERWGLAYREVMLAPKGVKISGKPCTSSELI 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme72968g00001 168 Gene3D - 1 156 IPR036457 -
Trme72968g00001 168 PANTHER PROTEIN PHOSPHATASE 3 135 IPR015655 GO:0004722|GO:0006470
Trme72968g00001 168 ProSiteProfiles PPM-type phosphatase domain profile. 1 168 IPR001932 -
Trme72968g00001 168 Pfam Protein phosphatase 2C 29 134 IPR001932 -
Trme72968g00001 168 SUPERFAMILY PP2C-like 3 135 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme72968g00001 Trme-Chr72968 1 685 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme72968g00001 4 156 PP2C-type Phosphatase Gene Family AT5G06750 43.137 9.50e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme72968g00001 K01102 - tpra:123896634 147.517