Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme72902g00001 GGAGGTGAGGTTGGGAGGCTTAGCATTGTCGGTGGTGCTGAGATTGGTCCCCTTCGATGCTGGCCAGGAGGTCTATGCCTTTCAAGGTCAATAGGAGACATGGATGTTGGGGAGTTTATAGTTCCAATACCATATGTCAAACAAGTGAAGCTATCAAAAGCCGGTGGGAGGCTTATAATTGCTTCTGATGGCATATGGGATGCTGTATCATCAGAAATGGCAGCAAAATCTTGCCGTGGTTTGCCTGCCGAACTTGCTGCTATGCAGGTTGTCAAGGAAGCATTAAGAACTAGAGGGTTAAAGGATGATACAACATGCATAGTAGTTGACATAATCCCACCTGATAACGAATTGCCACCAACACCTCCCCCCAAAAAGCGGAATAAGCTGAGAGATCTTTTTTTGTTCAGGAAGAGGTCCCGTGATACCGCTGGC 435 0.4713 GGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLIIASDGIWDAVSSEMAAKSCRGLPAELAAMQVVKEALRTRGLKDDTTCIVVDIIPPDNELPPTPPPKKRNKLRDLFLFRKRSRDTAG 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme72902g00001 145 Pfam Protein phosphatase 2C 23 93 IPR001932 -
Trme72902g00001 145 ProSiteProfiles PPM-type phosphatase domain profile. 1 111 IPR001932 -
Trme72902g00001 145 CDD PP2Cc 3 111 IPR001932 -
Trme72902g00001 145 SUPERFAMILY PP2C-like 7 111 IPR036457 -
Trme72902g00001 145 PANTHER PROTEIN PHOSPHATASE 7 110 IPR015655 GO:0004722|GO:0006470
Trme72902g00001 145 Gene3D - 1 113 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme72902g00001 Trme-Chr72902 1 807 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme72902g00001 1 143 PP2C-type Phosphatase Gene Family AT1G68410 80.556 4.85e-78 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme72902g00001 - - tpra:123901213 271.552