Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme72855g00001 AAATCGGCTAGGTTGAAACAGGCCAAAGAAGAGGCTGAAAAGGAGATTGCTGAATACCGGGCTAAGCTTGAGGCTGAGTTTCAAAAGAAAGTGTCAGATAGTAGTGGTGATTCTGGAGCTAATGTCAAGCGACTTGACCAAGAAACCGAAGAAAAAATTCATCACCTGAAAACAGAGGCTGCAAGAATATCAGATGATGTTGTTGCTATGCTCCTGAAGTATGTAACAACTGTGAAAAAATAG 243 0.4115 KSARLKQAKEEAEKEIAEYRAKLEAEFQKKVSDSSGDSGANVKRLDQETEEKIHHLKTEAARISDDVVAMLLKYVTTVKK 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme72855g00001 80 Coils Coil 2 29 - -
Trme72855g00001 80 FunFam V-type proton ATPase subunit G 1 80 - -
Trme72855g00001 80 Pfam Vacuolar (H+)-ATPase G subunit 1 79 IPR005124 GO:0016471|GO:0046961|GO:1902600
Trme72855g00001 80 Gene3D - 1 80 - -
Trme72855g00001 80 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 80 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme72855g00001 Trme-Chr72855 301 638 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme72855g00001 1 78 Primary Pumps ATPases(2) AT4G23710 66.667 5.84e-30 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme72855g00001 K02152 - gmx:100306550 139.428