Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme72838g00001 ATGGTACTCACCAAGATGCGAGAAATTGCTGAGGCATATTTAGAATCACCGGTTAAAAATGCAGTTGTTACTGTGCCAGCTTACTTTAGTGANTCTCAGAGAAAAGCCACTATAGATGCTGGTGCTATTGCTGGCCTAAATGTTCTGAGGGTAATGAATGAACCTACTGCCGCTGCCGTTGCTTATGGCCTTGACAAGAGAACGAACTGTGTTGAAGAGCGAAATATTTTTGTCTTTGATCTCGGCGGTGGCACTTTTGATGTGTCTCTACTAACAATTAAAGATAACATCTTCCAAGTTAAGGCAACTGCAGGAAACACCCACCTTGGTGGAGAGGACTTTGATAATAGAATGGTCAASTACTTTGTACAAGAGTTCAAGAGAAAGAACAAATTAGACATAAGTGGAAATGCAAAAGCGTTGAGGAGGTTGAGAATAGCTTGCGAGAGGGCTAAAAGATCACTTTCGTTCCTTGTTGTCTCCCCAATTGAGTTAGATTCTTTATTTGAAGGCATTGATTTTTGTTCGTCAATCAATCGTGCCAAGTTTGAAGAAATGAATATGGATCTTTTCAAGGAGTGTATGAAGATTGTTGAGAGCTGTCTTACAGATGCTAACCTAGACAAGAGTAAGGTTGATGATGTTGTTCTTGTTG 655 0.4 MVLTKMREIAEAYLESPVKNAVVTVPAYFSXSQRKATIDAGAIAGLNVLRVMNEPTAAAVAYGLDKRTNCVEERNIFVFDLGGGTFDVSLLTIKDNIFQVKATAGNTHLGGEDFDNRMVXYFVQEFKRKNKLDISGNAKALRRLRIACERAKRSLSFLVVSPIELDSLFEGIDFCSSINRAKFEEMNMDLFKECMKIVESCLTDANLDKSKVDDVVLV 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme72838g00001 218 PANTHER HEAT SHOCK PROTEIN 70KDA 1 218 IPR013126 GO:0005524|GO:0140662
Trme72838g00001 218 ProSitePatterns Heat shock hsp70 proteins family signature 2. 78 91 IPR018181 -
Trme72838g00001 218 PRINTS 70kDa heat shock protein signature 21 41 - -
Trme72838g00001 218 PRINTS 70kDa heat shock protein signature 84 94 - -
Trme72838g00001 218 PRINTS 70kDa heat shock protein signature 212 218 - -
Trme72838g00001 218 FunFam Heat shock 70 kDa 110 193 - -
Trme72838g00001 218 Pfam Hsp70 protein 1 218 IPR013126 GO:0005524|GO:0140662
Trme72838g00001 218 SUPERFAMILY Actin-like ATPase domain 1 66 IPR043129 -
Trme72838g00001 218 Gene3D Actin; Chain A, domain 4 114 193 - -
Trme72838g00001 218 Gene3D - 1 74 - -
Trme72838g00001 218 Gene3D - 75 218 - -
Trme72838g00001 218 FunFam Endoplasmic reticulum chaperone BiP 1 79 - -
Trme72838g00001 218 SUPERFAMILY Actin-like ATPase domain 73 218 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme72838g00001 Trme-Chr72838 30 684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme72838g00001 1 218 Calmodulin-binding Proteins AT3G12580 73.394 1.32e-115 342