Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme72785g00001 ATGGCTACTGAGGAGTTTCCTAAGCGAAATGATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGACGACGATACTTTGACTTCTAATTGGAATGATCTTCTTGCTGATAATATTCAAGATCTTGAGCCAAAGGTTAAGGCGGCGGATCCCATTTCGAAGTCATCTTCACAATTTTTGGCAGGACACCAATCGCAAGGCCACCAACAACTTCCAGCTCTATCTGGAGAAAACCATGTTGGTGTCGCTCCATCTTCCTCAGCAAATTCTGCACCTGCCAAGCCACGGATGCGTTGGACTCCTGAGCTTCACGAGGCATTTGTGGAGGCTGTCACCCAACTTGGTGGGAGTGAAAGAGCTACCCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGCCACTTACAGAAATACAGGACAGCTAGATATAGACCAGAGTCTTCTGAAG 469 0.4627 MATEEFPKRNDWQEWADQLISDDDTLTSNWNDLLADNIQDLEPKVKAADPISKSSSQFLAGHQSQGHQQLPALSGENHVGVAPSSSANSAPAKPRMRWTPELHEAFVEAVTQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSE 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme72785g00001 156 Pfam Myb-like DNA-binding domain 95 146 IPR001005 -
Trme72785g00001 156 NCBIfam myb-like DNA-binding domain, SHAQKYF class 93 147 IPR006447 GO:0003677
Trme72785g00001 156 MobiDBLite consensus disorder prediction 47 95 - -
Trme72785g00001 156 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 67 154 IPR044848 GO:0003700
Trme72785g00001 156 MobiDBLite consensus disorder prediction 50 72 - -
Trme72785g00001 156 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 150 IPR017930 -
Trme72785g00001 156 SUPERFAMILY Homeodomain-like 91 147 IPR009057 -
Trme72785g00001 156 FunFam Myb family transcription factor 92 150 - -
Trme72785g00001 156 Gene3D - 92 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme72785g00001 Trme-Chr72785 24 767 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme72785g00001 2 156 G2-like Transcription Factor Family AT4G28610 59.615 1.23e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trme72785g00001 Myb_DNA-binding 6.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme72785g00001 - - gmx:100810560 257.684