Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme72755g00001 ATGGAGGAAATGTACGGAGTACCATCAACGGTTGAATACGGCGGCGACAAATCACTTATGACACCGGAGAATCTAATTTTTCCTAATGACTACAACACCTTCCTCATGTCCACTTCATCCACAACCCGAATTCCTATGTTCGGATCCGACTATATCTTCACCGCCGCAGCAGAACCTTCTTCCGCCGCAATTCATCATGACGTGGCAGTTTCTACTGTTATGAAATCCAAAATCGCTTCTCATCCTTACTACCCTCGCCTCCTTCAAGCCTACATCGATTGTCAAAAGGTCGGTGCTCCTCCTGAAATCGCGCGTTTGTTAGAAGAAATTCGTCACGAAAATGATCAAGTTAAAAGAGACGTAGTTGTTTCCACGTGTTTTGGAGCCGATCCCGAGCTTGATGAATTTATGGAAACTTACTGTGATATGCTTGTGAAGTATAAATCAGACCTTACTCGTCCTTTTGATGAAGCTACAACGTTTCTAAACAAGATCGAAACTCAACTTAGCCATCTCTGCACTGGTGCTTCAG 532 0.4398 MEEMYGVPSTVEYGGDKSLMTPENLIFPNDYNTFLMSTSSTTRIPMFGSDYIFTAAAEPSSAAIHHDVAVSTVMKSKIASHPYYPRLLQAYIDCQKVGAPPEIARLLEEIRHENDQVKRDVVVSTCFGADPELDEFMETYCDMLVKYKSDLTRPFDEATTFLNKIETQLSHLCTGAS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme72755g00001 177 SMART KNOX1_2 72 116 IPR005540 GO:0003677|GO:0005634
Trme72755g00001 177 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 66 174 - -
Trme72755g00001 177 Pfam KNOX2 domain 127 173 IPR005541 GO:0003677|GO:0005634
Trme72755g00001 177 Pfam KNOX1 domain 74 115 IPR005540 GO:0003677|GO:0005634
Trme72755g00001 177 SMART KNOX2_2 123 174 IPR005541 GO:0003677|GO:0005634
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme72755g00001 1 175 Homeobox Transcription Factor Family AT1G23380 60.317 1.89e-67 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme72755g00001 - - lja:Lj2g3v1415210.1 267.314