Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme72728g00001 GTGGCTTCGTTTATTGCTCAATCTCAGGTTTTCCTCATGGATCCTTGGTGGAACCCTGCAGTGGAGCGTCAGGCTCAGGACAGAATTCACCGGATAGGGCAATACAAACCAATCAGAATTGTGAGATTTGTCATCGAAAACACAATTGAGGAGAGGATCTTGAAACTGCAAGAGAAGAAGGAACTAGTATTTGAAGGGACTATAGGCGGCTCTAACGAGGCTCTAGGGAAGTTGACGGTGGCCGACTTAAAATTTCTCTTTGCTAACTAA 270 0.4519 VASFIAQSQVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTIGGSNEALGKLTVADLKFLFAN 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme72728g00001 89 Gene3D - 3 88 IPR027417 -
Trme72728g00001 89 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 6 88 - -
Trme72728g00001 89 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 88 IPR027417 -
Trme72728g00001 89 CDD SF2_C_SNF 8 44 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme72728g00001 8 87 RAD5 or RAD16-like Gene Family AT1G05120 82.500 1.03e-45 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme72728g00001 K15083 - sly:101249085 158.303