Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme72705g00001 ATGGAGATATTGCTTCAACTGACAGGGTCAACAAGTCGTCATCATCTACCAGTTTCAGGTCCTGAAAATGGCCAAGAAGTGCCTGACATGGACCAAGATTCCAAGAAGAACAGGGTGAAGGATAAAAGCAACAAAACAGTACCCTTTTATAAGCTTTTCTCATTTGCAGACTCATGGGATTATTTGTTGATGTTTGTTGGGACGATAAGTGCTGTTGCGAATGGAGTCTCTATGCCTTTACTGACTATAATTATTGGAGATGCTATTGATGCTTTTGGAGGAAATGTTAACACTAAACAAGTAGTTCATCAAGTTTTCAAGGTGTCTCTCAGGTTTGCAATTATAGGCGCAGGCGCATTTTTTGCAGCGTTTCTGC 376 0.4069 MEILLQLTGSTSRHHLPVSGPENGQEVPDMDQDSKKNRVKDKSNKTVPFYKLFSFADSWDYLLMFVGTISAVANGVSMPLLTIIIGDAIDAFGGNVNTKQVVHQVFKVSLRFAIIGAGAFFAAFL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme72705g00001 125 SUPERFAMILY ABC transporter transmembrane region 52 124 IPR036640 GO:0005524|GO:0016020
Trme72705g00001 125 Gene3D ABC transporter type 1, transmembrane domain 42 125 IPR036640 GO:0005524|GO:0016020
Trme72705g00001 125 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 21 125 IPR039421 -
Trme72705g00001 125 MobiDBLite consensus disorder prediction 7 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme72705g00001 Trme-Chr72705 36 492 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme72705g00001 40 124 Calmodulin-binding Proteins AT2G36910 33.721 1.29e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme72705g00001 K05658 - gmx:100777713 146.362