Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme726944g00001 ATGCTTATCGGTGGAAGTGATTCATCATCTTTAACCATGGAATGGGCTTTCTCAGAAATGCTGAAAAATCCTAAAGCACTAAAAAGGGCTCAAGAAGAAGTTAGACAAGCTTTTGGTAGTAGAGGATATGTTGAT 135 0.3778 MLIGGSDSSSLTMEWAFSEMLKNPKALKRAQEEVRQAFGSRGYVD 45
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme726944g00001 45 Pfam Cytochrome P450 1 41 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme726944g00001 45 SUPERFAMILY Cytochrome P450 1 44 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme726944g00001 45 Gene3D Cytochrome P450 1 45 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme726944g00001 45 PANTHER OS08G0105600 PROTEIN 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme726944g00001 Trme-Chr726944 1 135 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme726944g00001 1 35 Cytochrome P450 AT3G48270 60.000 7.98e-11 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme726944g00001 - K20617 twl:119985149 68.1662