Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme726641g00001 AATGCATTAGGCACAGGAGTTCAAAGTGATAGCAAGGACTACAAGGAAGCACCACCAGCACCTTTATTTGAGCCAGGGGAGTTGAAGTCATGGTCTTTTTATAGAGCTGGGATTGCTGAGTTTGTTGCAACTTTCTTGTTTCTTTACATCACTGTTTTAACTGTGATGGGTGTGAATAGGTCACACTCTAAGTGTGCCTCTGTTGGTATTCAAGGAATTGCTTGGTCTTTTGGTG 235 0.4255 NALGTGVQSDSKDYKEAPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVNRSHSKCASVGIQGIAWSFG 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme726641g00001 78 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 4 78 IPR034294 -
Trme726641g00001 78 MobiDBLite consensus disorder prediction 1 20 - -
Trme726641g00001 78 Pfam Major intrinsic protein 27 78 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme726641g00001 78 Gene3D Glycerol uptake facilitator protein. 20 78 IPR023271 -
Trme726641g00001 78 SUPERFAMILY Aquaporin-like 27 78 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme726641g00001 Trme-Chr726641 14 248 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme726641g00001 3 78 Major Intrinsic Protein MIP AT4G00430 81.579 1.49e-41 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme726641g00001 K09872 - gmx:100812711 142.124