Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme72519g00001 ATGAAGATAGCCCTTGATGCTGCCAAGGGTCTGGCTTTTCTTCACAGTAATGAAGTCGAAATGATACATGGAGATTTCAAAACTTCTAATATCTTGATTGATTCTAACCACAACGCAAAACTATCCGATTTTGGGTTGGATAAATTTAGAGATGAAGAAAGTGATGCGAACTGTTGGGATAGGGTACCTATAAAGTGCCCCCAACCACACAGATACATAGCACCTGAGTATTGGATGACAGGTCGCCAAACCAAAAGGAGTGATATATACAGTTTTGGAGTTGTTCTGCTGGAAATTATATCTGGCAAATGTGCACATGCTAAAAAATGGCCACAATGTGAACGCAGTTTAGTTGAATGGGACAAGGCCAAGCCGTTACTCATCAACAAACAAAAGCTCTTCCAATTTATGGATTCCTATTTAGAAGGTCAATATTCGCCACGTGAAGCAATGGAAGTTGCTAGCATTGCAATTCAAT 478 0.3996 MKIALDAAKGLAFLHSNEVEMIHGDFKTSNILIDSNHNAKLSDFGLDKFRDEESDANCWDRVPIKCPQPHRYIAPEYWMTGRQTKRSDIYSFGVVLLEIISGKCAHAKKWPQCERSLVEWDKAKPLLINKQKLFQFMDSYLEGQYSPREAMEVASIAIQ 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme72519g00001 159 Pfam Protein tyrosine and serine/threonine kinase 2 109 IPR001245 GO:0004672|GO:0006468
Trme72519g00001 159 SUPERFAMILY Protein kinase-like (PK-like) 2 153 IPR011009 -
Trme72519g00001 159 ProSiteProfiles Protein kinase domain profile. 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme72519g00001 159 PANTHER OS01G0588500 PROTEIN-RELATED 1 159 - -
Trme72519g00001 159 ProSitePatterns Serine/Threonine protein kinases active-site signature. 21 33 IPR008271 GO:0004672|GO:0006468
Trme72519g00001 159 Gene3D Transferase(Phosphotransferase) domain 1 1 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme72519g00001 Trme-Chr72519 31 743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme72519g00001 1 157 Receptor kinase-like Gene Family AT3G58690 46.203 2.98e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trme72519g00001 PK_Tyr_Ser-Thr 6.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme72519g00001 - - vvo:131661826 176.407