Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7243g00001 TACGGAGTTGACAAGTATGACATTGGAACTGCATTTGGCCATTTTGGTATTGCGGTTGATGATGTAAGTTTTTCAAACTTTGGTAGCACTACTTTGTTCATTCCTGTGGAACTAATAAGAGCTAAGGGTGGCAAAATAACTAGAGAGCCTGGTCCTGTCAAAGGAGGCAAAACAGTAATTGCATTTGTTGAAGATCCTGATGGTTACAAATTTGAACTTTTGGAAAGAGGTCCCACTCCTGAGCCATTGTGCCAAGTGATGCTTCGAGTGGGTGATCTTAACCGTTCAATAGAATTTTACGAGAAGGCTTTTGGTATGGAGCTGCTTCGTACACGGGATAATCCAGAGTCCAAGTATACCATAGCAATGCTGGGTTATGGTCCAGAAGATAAAACGACTGTTCTGGAGTTGACTTACAATTATGGAGTCACTGAATATGATAAAGGGAATGCTTATGCTCAGATTGCAATAGGCACAGATGATGTGTACAAAACTGCGGAAGCGATTAAACTATCCACGGGAAAGCTTACTCGGGAACCTGGACCGTTGCCTGGTATCAACACAAAAATTACTGCATGCTTGGATCCCGATGGATGGAAGACGGTATGTCTCTTGAACTTAATGATTTAA 630 0.419 YGVDKYDIGTAFGHFGIAVDDVSFSNFGSTTLFIPVELIRAKGGKITREPGPVKGGKTVIAFVEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPESKYTIAMLGYGPEDKTTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLSTGKLTREPGPLPGINTKITACLDPDGWKTVCLLNLMI 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7243g00001 209 ProSitePatterns Glyoxalase I signature 1. 85 106 IPR018146 GO:0004462|GO:0046872
Trme7243g00001 209 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 83 200 IPR029068 -
Trme7243g00001 209 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 82 206 IPR037523 -
Trme7243g00001 209 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 37 73 IPR004360 -
Trme7243g00001 209 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 85 199 IPR004360 -
Trme7243g00001 209 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 6 81 IPR029068 -
Trme7243g00001 209 Gene3D - 1 77 IPR029068 -
Trme7243g00001 209 ProSitePatterns Glyoxalase I signature 2. 9 21 IPR018146 GO:0004462|GO:0046872
Trme7243g00001 209 FunFam Lactoylglutathione lyase 79 208 - -
Trme7243g00001 209 Gene3D - 79 206 IPR029068 -
Trme7243g00001 209 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 1 76 IPR037523 -
Trme7243g00001 209 PANTHER LACTOYLGLUTATHIONE LYASE 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7243g00001 Trme-Chr7243 430 1782 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7243g00001 83 199 Calmodulin-binding Proteins AT1G08110 26.761 1.26e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7243g00001 K01759 - gmx:100775714 366.696