Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme72390g00001 ATGGCCAGAAAATACGAAGGACATGCTGTGGGAATAGACCTTGGAANNNNNNGAGTTGAAATTATCCACAACGATGAAGGAAATAAAATCACACCTTCTTTTGTTGCTTTTACTGATGATCAAAGGTTGGTCGGTGGTGCTGCTAAGGATCAGGCTGCTATCAACCCAGAGAACACTGTCTTTG 184 0.413 MARKYEGHAVGIDLGXXXVEIIHNDEGNKITPSFVAFTDDQRLVGGAAKDQAAINPENTVF 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme72390g00001 61 FunFam heat shock 70 kDa protein-like 3 61 - -
Trme72390g00001 61 Pfam Hsp70 protein 17 61 IPR013126 GO:0005524|GO:0140662
Trme72390g00001 61 PRINTS 70kDa heat shock protein signature 8 21 - -
Trme72390g00001 61 PRINTS 70kDa heat shock protein signature 26 38 - -
Trme72390g00001 61 PRINTS 70kDa heat shock protein signature 48 56 - -
Trme72390g00001 61 Gene3D - 1 61 - -
Trme72390g00001 61 SUPERFAMILY Actin-like ATPase domain 8 61 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme72390g00001 Trme-Chr72390 253 436 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme72390g00001 1 61 Calmodulin-binding Proteins AT3G12580 57.746 7.96e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme72390g00001 K03283 - vvo:131625172 87.8113