Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme72369g00001 ATGGCGGAATACGATCTAACACCACGAATCGCACCAAATCTCGACCGACATTTAGTCTTCCCTCTCCTCGAATTTCTTCAAGAAAGACAATTATACATCGATAACCATATCCTAAAAGCTAAGATCGATCTCTTAAACAACACAAACATGGTTGATTACGCTATGGATATTCACAAGACACTCTATCAAACTGAAGATGTGCCTCATGATATGGTTGAACGAAGAGCTGATGTTGTTGCTCGTCTCAAGTCTCTTGAAGATGCTGCTGCTCCTCTTGTTGCGTTTCTTCAGAATCCTTCTGCTGTTCAGGAATTGAGAGCTGATAAACTTTATAATATTCAGATGCTTAATGATAAATATCAGGTTTTGTCTTAG 375 0.3893 MAEYDLTPRIAPNLDRHLVFPLLEFLQERQLYIDNHILKAKIDLLNNTNMVDYAMDIHKTLYQTEDVPHDMVERRADVVARLKSLEDAAAPLVAFLQNPSAVQELRADKLYNIQMLNDKYQVLS 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme72369g00001 124 Pfam eIF3 subunit 6 N terminal domain 5 122 IPR019010 -
Trme72369g00001 124 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 1 122 IPR016650 GO:0003743|GO:0005737|GO:0005852
Trme72369g00001 124 SMART eIF3_N_2 5 121 IPR019010 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme72369g00001 Trme-Chr72369 93 467 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme72369g00001 4 122 Eukaryotic Initiation Factors Gene Family AT3G57290 78.151 7.41e-63 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme72369g00001 K03250 - gmx:100797748 222.246