LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme72317g00001	GGCTTAGCTAAGCTTGTTGATGATGGTGATGTTGGTCGTTCTTCCAATACCGTTGCTGGTTCATATGGATACATTGCTCCAGAATATGGCTATATGATGAAGATCACGGAGAAGAGCGACGTTTATAGCTACGGTGTAGTTTTGCTAGAAGTCTTGACTGGCAAGCAACCAATAGATCCAACAATACCAGATGGTTTACATGTTGTTGATTGGGTGAGACAGAAAAGAGGTCTTGAAGTACTTGATCCTACCTTACTTTCAAGACCGGAATCGGAAATAGAAGAAATGATCCAAGCATTGGGGATAGCTCTATTGTGTGTAAATTCATCTCCTGATGAAAGACCAACAATGAGAGATATAGCAGCAATGCTCAAAGAGATAAAGCATGAAAGAGAAGAATATGCAAAATTTGATGTGCTTTTAAAAGGGTCTCCTGCAAATGATGCAAAAGTTCTTGCAACATCTTCCAATGCATCAG	478	0.3996	GLAKLVDDGDVGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVLLEVLTGKQPIDPTIPDGLHVVDWVRQKRGLEVLDPTLLSRPESEIEEMIQALGIALLCVNSSPDERPTMRDIAAMLKEIKHEREEYAKFDVLLKGSPANDAKVLATSSNAS	159

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme72317g00001	159	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	1	129	-	-
	Trme72317g00001	159	Gene3D	Transferase(Phosphotransferase) domain 1	1	144	-	-
	Trme72317g00001	159	ProSiteProfiles	Chitin-binding type R&R domain profile.	1	60	IPR000618	-
	Trme72317g00001	159	Pfam	Protein tyrosine and serine/threonine kinase	1	123	IPR001245	GO:0004672\|GO:0006468
	Trme72317g00001	159	ProSiteProfiles	Protein kinase domain profile.	1	132	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trme72317g00001	159	SUPERFAMILY	Protein kinase-like (PK-like)	1	138	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme72317g00001	Trme-Chr72317	1	811	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme72317g00001	1	159	Receptor kinase-like Gene Family	AT5G56040	46.961	1.50e-42	148

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-1	Trme72317g00001		PK_Tyr_Ser-Thr	2.9e-12	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme72317g00001	-		-	vvo:131649742	301.597