Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7213g00001 ATGACTGAAGTTGAGAATCTGGCTAAACTTTCCCATCAAAATCTTATGGTGCTACACGGTTGCACTTCATTCCGTAGCGAAAAACTTATGCTTGTCTATGAGTATGTTGGCAATGGAACTGTGTATGATCATCTTCATGGTAATGAAGACAAATATGTCAGGCTCACTTGGGATAATAGGATGACTATTGCTGTGGAGACAGCAAGTGCGTTGAGGTATCTTCATGCATCTAACATCGTCCACAGAGACATCAAATCACGCAATATTCTTCTCACTGCCGAGTTGCATGTCAAATTAGGAGATTTTGGACTCGCGCGGCCTTTTCCAGAGGATCAAAGCCGTGTAGAAACAGGTCCACAAGGAACTTTAGGGTACATCGATCCGGAGTACCGCAGAGAATCTGAGCTTACTCACAAAAGTGACGTGTTTAGTTTTGGAGTGGTATTGCTTGAATTGATATCATCTCTGCGTGCTTTTGATTACAGAAGGTCTGATCATCATCTTTCTGACAAGGCTAAGAACAAATTTGAAAATAATGCTTTGGATCAACTTTTGGATCGTACCCTAGATTTTGATTCAGATCCGAGAGTGGAGGAAATGATGATGGGCGTGGCTGAGTTAGCAGTTCGGTGTGTGCAAGATTCCAAACATGCGAGACCGTCCATGGATGAAGTGCTCGTAGCTTTACAAAACATTCAGAATGTTGGTGGGAATGCTCCGAATGCAGGCCAACCTGAAGCAGTGGACAATTATAACCCAGATGATGATGATGAGATTGTGGAATTGTTGAATTGA 795 0.4264 MTEVENLAKLSHQNLMVLHGCTSFRSEKLMLVYEYVGNGTVYDHLHGNEDKYVRLTWDNRMTIAVETASALRYLHASNIVHRDIKSRNILLTAELHVKLGDFGLARPFPEDQSRVETGPQGTLGYIDPEYRRESELTHKSDVFSFGVVLLELISSLRAFDYRRSDHHLSDKAKNKFENNALDQLLDRTLDFDSDPRVEEMMMGVAELAVRCVQDSKHARPSMDEVLVALQNIQNVGGNAPNAGQPEAVDNYNPDDDDEIVELLN 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7213g00001 264 Gene3D Transferase(Phosphotransferase) domain 1 1 255 - -
Trme7213g00001 264 SUPERFAMILY Protein kinase-like (PK-like) 2 232 IPR011009 -
Trme7213g00001 264 Pfam Protein tyrosine and serine/threonine kinase 1 227 IPR001245 GO:0004672|GO:0006468
Trme7213g00001 264 PIRSF ILK 1 239 - -
Trme7213g00001 264 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 240 IPR044652 GO:0004672
Trme7213g00001 264 ProSiteProfiles Protein kinase domain profile. 1 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme7213g00001 264 SMART serkin_6 1 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme7213g00001 264 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Trme7213g00001 264 MobiDBLite consensus disorder prediction 236 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7213g00001 Trme-Chr7213 1055 1849 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7213g00001 1 240 Receptor kinase-like Gene Family AT1G25390 51.852 6.14e-76 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Trme7213g00001 PK_Tyr_Ser-Thr 4.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7213g00001 - - psat:127115365 294.278