Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme72080g00001 ATGGAGATTCCATACTGTATTGTCAAGGGCAAGGCCCGTCTTGGAACTGTTGTCCACAAGAAAACTGCATCTGTNTTGTGCTTGACAACTGTTAAAAATGAAGATAAAATGGAGTTCAGCAGGGTCCTAGAGGCGATCAAGGCAAACTTCAACGACAAATATGATGAGTATAGGAAGAAGTGGGGTGGTGGAATCATGGGTTCCAAATCCCAAGCCAAAACCAAGGCGAAGGAAAGGCTCATTGCCAAGGAGGCTGCCCAGAGGATGACCTAG 273 0.4615 MEIPYCIVKGKARLGTVVHKKTASVLCLTTVKNEDKMEFSRVLEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLIAKEAAQRMT 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme72080g00001 90 PRINTS Ribosomal protein L7A family signature 49 69 IPR001921 -
Trme72080g00001 90 PRINTS Ribosomal protein L7A family signature 17 41 IPR001921 -
Trme72080g00001 90 SUPERFAMILY L30e-like 1 51 IPR029064 -
Trme72080g00001 90 Gene3D - 1 84 IPR029064 -
Trme72080g00001 90 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 1 38 IPR004038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme72080g00001 Trme-Chr72080 324 777 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme72080g00001 1 90 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 87.778 4.31e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme72080g00001 K02936 - gmx:100792324 177.563