Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trme72012g00001 ATCCGCAAAATCTTCCATGTAACCATCACCGGAGAATCAACAACCACCACCGGAGCAACCGATTCGAGAATCGTTTATCTCGAACTAACCGCCGCAGAGATTCTCAGCGAAGGAAAAGACCTTCTCCTTTCTCGCGATGTTATGGAACGAGTCCTCATCGATCGTCTTTCCGGCGATTTCCCCACCGCAGGTGCCGAAAACTCACCGTTTCAGTATCTTCTCGGTTGTTACAACCGAGCTCACGATGAAGGGAAGAAAATCGTGAACATGAAGGATAAAAACCTTAGGTCAGAGATGGAAACTGTTGTGAAACAAGCGAAGAAACTCTGCGTTTCGTATTGTAGAATTCATCTNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNTTGTTGCCGCTGATTATATCGGAGTGTGGTGGAGGCGGTGGAATGGGAGTTTTCGGCAGTGGTAGTGATACCGGAGGAGTGAAAAGTCCTCCAGGGTTTTTAGATGAGTTTTTTAGGGATCCTGATTTTGAAAGTTTGGATAGAATTTTGAAAGGGTTGTATGAGGAATTAAGAGGGAATGTGATGAAAATTTCGGTTCTTGGAAATTTTCAGGATTCTCTTAGGGCTTTGTTGTTTTTGGTTAGGTTACCTGTTGGTGCTAAGTCTCTTGTGAGCATTGAATGGTGGATTCCTAAAGGTGTTTATATGAATGGTCGCGCTATCGAAATGACTAGCATTTTGGGTCCTTTTTTCCATATCAGTGCTCTTCCTGATCACACCTTCTTCAAGAGTAATCCGGAT 813 0.4071 IRKIFHVTITGESTTTTGATDSRIVYLELTAAEILSEGKDLLLSRDVMERVLIDRLSGDFPTAGAENSPFQYLLGCYNRAHDEGKKIVNMKDKNLRSEMETVVKQAKKLCVSYCRIHLXXXXXXXXXXXXXXXXXXXLLPLIISECGGGGGMGVFGSGSDTGGVKSPPGFLDEFFRDPDFESLDRILKGLYEELRGNVMKISVLGNFQDSLRALLFLVRLPVGAKSLVSIEWWIPKGVYMNGRAIEMTSILGPFFHISALPDHTFFKSNPD 271
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trme72012g00001 271 PANTHER UBIQUITINATION FACTOR E4 1 262 IPR045132 GO:0000151|GO:0030433|GO:0034450
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme72012g00001 1 271 U-box Gene Family AT5G15400 63.441 2.94e-109 337
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme72012g00001 K10597 - gmx:100806175 362.073