Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme71933g00001 | GTTGGGGAGAGGGGAATTCAAATGTCAGGGGGACAAAAGCAAAGGATTGCAATTGCAAGAGCCATAATAAAAAAGCCAAAGATTCTATTGTTAGATGAAGCAACTAGTGCACTCGACTCTGAATCCGAACGAGTTGTCCAAGAAGCTTTAGACAAAGCCGCAGTTGGACGCACCACCATCATCATCGCTCACCGCTTATCCACCATCCAAAATGCAGACATCNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANGAAAGCCTAATGCAAAATGACAATTCTCTTTACGCATCCCTTGTTCATCTCCAAAAAAACAAAAATGACCAAAACAATGACACTCCGTTTATATTGAGTAGAGATCACATGCAAAACGCGAGTAGTGGTAGACTCGTGAATCGTTCTAGCTCTTTCAACTCAATGACACGTGGTGATAGTTGTGGTGGTGACGATGATGATAATGTTGTTGTAGTTGATGGAAATGAATGTGCCAGAGTGGAAGCAAGCGTGTTTAGGGTGTTTGAATGCGGTTTTATTTGGTGCGGTTCAACCTATATCCGCATTTGTGATAGGGTCAGTTGCTGGAGTTTATTTTCTGAATGA | 612 | 0.3922 | VGERGIQMSGGQKQRIAIARAIIKKPKILLLDEATSALDSESERVVQEALDKAAVGRTTIIIAHRLSTIQNADIXXXXXXXXXXXXXXXESLMQNDNSLYASLVHLQKNKNDQNNDTPFILSRDHMQNASSGRLVNRSSSFNSMTRGDSCGGDDDDNVVVVDGNECARVEASVFRVFECGFIWCGSTYIRICDRVSCWSLFSE | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme71933g00001 | 203 | Coils | Coil | 90 | 95 | - | - | |
| Trme71933g00001 | 203 | PANTHER | ABC TRANSPORTER B FAMILY | 1 | 150 | IPR039421 | - | |
| Trme71933g00001 | 203 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 107 | IPR027417 | - | |
| Trme71933g00001 | 203 | Gene3D | - | 1 | 122 | IPR027417 | - | |
| Trme71933g00001 | 203 | Pfam | ABC transporter | 3 | 36 | IPR003439 | GO:0005524 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme71933g00001 | Trme-Chr71933 | 76 | 767 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme71933g00001 | 1 | 151 | Calmodulin-binding Proteins | AT2G36910 | 50.000 | 1.07e-35 | 130 |