Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme71858g00001 | GGTCAGAGGTGTACCGCTGTTAAGGTTGTCCTGGTAATAGAATCGGTTGCTGATGCTTTGGTTGAGAAAGTGAAGGCTAAGGTTGCAAAACTAAGTGTTGGAGCACCTGAAGATGACAGTGATATCACCCCAGTNGTATCAGAATCATCAGCCAATTTCATTGAAGGCCTTGTGAATGATGCTAAACAGAAAGGAGCAACATTCTGCCAAGAATACAAGAGAGAAGGGAATCTCATTTGGCCTTTGTTACTTGATAATGTTAGGCCAGACATGAGAATTGCATGGGAGGAGCCATTTGGACCAGTTTTGCCGGTAATTAGGATCAATTCTGTTGAAGAAGGAATCCATCATTGTAATGCTAGCAACTTTGGACTTCAGGGATGTGTATTCACAAAGGATATCAACAAAGCAATGCTGATTAGTGATGCAATGGAATCAGGAACAATTCAGATAAATTCTGCCCCAGCTCGGGGGCCAGATCATTTTCCCTTTCAGGTGAAACCTCTATAA | 510 | 0.4235 | GQRCTAVKVVLVIESVADALVEKVKAKVAKLSVGAPEDDSDITPVVSESSANFIEGLVNDAKQKGATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMESGTIQINSAPARGPDHFPFQVKPL | 169 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme71858g00001 | 169 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 1 | 165 | IPR016163 | GO:0016620 | |
| Trme71858g00001 | 169 | Pfam | Aldehyde dehydrogenase family | 1 | 164 | IPR015590 | GO:0016491 | |
| Trme71858g00001 | 169 | PANTHER | ALDEHYDE DEHYDROGENASE | 1 | 165 | - | - | |
| Trme71858g00001 | 169 | FunFam | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase | 1 | 163 | - | - | |
| Trme71858g00001 | 169 | SUPERFAMILY | ALDH-like | 1 | 164 | IPR016161 | GO:0016491 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme71858g00001 | 1 | 165 | Aldehyde Dehydrogenase Gene Family | AT2G24270 | 90.909 | 5.37e-109 | 318 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme71858g00001 | K00131 | - | qsu:111987214 | 302.753 |