Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme71833g00001 ATGTATGACATCCAAGCGAAGAAGGTTAACACCTTGATCAGGCCTGATGGCACCAAGAAGGCCTATGTTAGGTTGACTCCTGACTACGATGCATTGGATGTAGCAAACAAGATTGGGATTATCTAA 126 0.4365 MYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 41
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme71833g00001 41 Gene3D - 1 41 IPR012677 -
Trme71833g00001 41 PANTHER 60S RIBOSOMAL PROTEIN L23A 1 41 IPR013025 GO:0003735|GO:0005840|GO:0006412
Trme71833g00001 41 ProSitePatterns Ribosomal protein L23 signature. 19 34 IPR001014 GO:0019843
Trme71833g00001 41 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 38 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme71833g00001 Trme-Chr71833 7 744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme71833g00001 1 41 Cytoplasmic Ribosomal Protein Gene Family AT3G55280 97.561 2.34e-23 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme71833g00001 K02893 - pda:103723931 85.1149