Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7181g00001 AGCTCTGAGTGGAGCAGGGAGCAAGACATAGCATTTGAGAATGCCTTGGCGACTTATCCTGAGGATGCTTCGGATCGATGGGAGAAGATTGCGGCTGATGTACCGGGGAAGACTGTGGAAGAAATTAAAGAGCATTATGAGCTCTTGGTTGATGATGTTAGCCAGATTGAAGCTGGTTGTGTGCCTCTACCATCGTATAATTCTTCTTCGGAGGGGTCAACAGGTCAAGCTAGTGATGAAGGAGTTGGGGGAAAAAAGAATGGGCACAATAACGAGTCTAACCATGGAACTAAGGCTTCAAGATCGGATCAAGAACGACGGAAGGGTATTGCTTGGACTGAGGAAGAACACAGGCAAGTTTTATCTTTGCTTATATGTTTTTGA 384 0.4557 SSEWSREQDIAFENALATYPEDASDRWEKIAADVPGKTVEEIKEHYELLVDDVSQIEAGCVPLPSYNSSSEGSTGQASDEGVGGKKNGHNNESNHGTKASRSDQERRKGIAWTEEEHRQVLSLLICF 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7181g00001 127 ProSiteProfiles SANT domain profile. 1 49 IPR017884 -
Trme7181g00001 127 SMART sant 1 52 IPR001005 -
Trme7181g00001 127 MobiDBLite consensus disorder prediction 61 77 - -
Trme7181g00001 127 CDD SANT 3 50 IPR001005 -
Trme7181g00001 127 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Trme7181g00001 127 MobiDBLite consensus disorder prediction 96 113 - -
Trme7181g00001 127 FunFam Transcription factor SRM1 1 63 - -
Trme7181g00001 127 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 121 IPR043363 -
Trme7181g00001 127 Gene3D - 2 49 - -
Trme7181g00001 127 SUPERFAMILY Homeodomain-like 2 57 IPR009057 -
Trme7181g00001 127 MobiDBLite consensus disorder prediction 60 113 - -
Trme7181g00001 127 Pfam Myb-like DNA-binding domain 2 46 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7181g00001 Trme-Chr7181 1 384 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trme7181g00001 Myb_DNA-binding 6.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7181g00001 - - gmx:100820272 206.453