Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme71798g00001 ATGTTCCAGCTTATGCAAAAAATGACATTCAAAGTTGAGGGGTATTTGCATGAGCAATGTCAGCCGCCTGTAGTACACAGAAATTTGAAGTCTGCCAATGTCCTCCTTGATGATGATCTATCTGTGCGTGTATCTGATTGTGGTTTAGCTCCGTTGATAGCTTCAGGGTCTGTAACTCAGCTCTCGGGGAACCTGCAATCAACTTATGGTTATGGAGCTCCAGAATTTGAATCGGGAACTTACACTTACCAAAGCGAT 258 0.4341 MFQLMQKMTFKVEGYLHEQCQPPVVHRNLKSANVLLDDDLSVRVSDCGLAPLIASGSVTQLSGNLQSTYGYGAPEFESGTYTYQSD 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme71798g00001 86 SUPERFAMILY Protein kinase-like (PK-like) 15 86 IPR011009 -
Trme71798g00001 86 ProSiteProfiles Protein kinase domain profile. 1 86 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme71798g00001 86 Pfam Protein kinase domain 14 83 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme71798g00001 86 PANTHER OS01G0253100 PROTEIN 15 86 - -
Trme71798g00001 86 Gene3D Transferase(Phosphotransferase) domain 1 3 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme71798g00001 Trme-Chr71798 8 529 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme71798g00001 15 86 Strubbelig Receptor Gene Family AT4G03390 79.167 9.43e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Trme71798g00001 Pkinase 7.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme71798g00001 - - mtr:25492087 142.124