Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme71768g00001 ATGTATGAGCATGAGTTTATTGGGAAGATTGTTGAAGAAGTCTTAAAAAAGATAACACTTGGTATTACCTTACATGTTGGTGATTACCTAGTTGGGCTGGAGCCTCAAAAACAACGTGTGATTTCGYTTTTGAATGTTGGGTCTGATGATACGGTCCACATGGTAGGGATACATGGGATTGGTGGAATAGGGAAAACCACTCTTGCTCTTGCCGTTTTTAATTTGATTGCCCATCAATTTGAAGGCTCATGTTTCCTTGAAAATGTTAGAGAAAATTCTGAGAAACATGGGTTGCCATTTCTCCAAAAAATCCTTCTTTCTAAAGTAGTCGGGAAGAAAATTGAGTTAGATGGTGACCGACAAGGAATTTCCATGATACAACAGAGGTTTCGACAAAAAAAGTTTCTTTTGGTTCTAGACGATGTTAACGAGCTTGAGCAATTACAAGCTATTGCTGGAAAATCTAATTGGTTTGGTCTTGGGAGTAGAGTTATCATCACAACTCGAAACCAAAGGTTGCTAACACTGCATGGGGTTGAACATACATATGAGGTGAAGGAATTGAATAACAAAGATGCTTTTGAGTTGGTTAGATGGAATGCTTTTAAAAATGAAAAGACTGACAGAGNNNNNTNNNNNNNNNNGCATGTTTTAGAACGTGCCGTAGCATATGCTTCAGGTCTTCCACTCGCTTTGGAAGTCATAG 706 0.3782 MYEHEFIGKIVEEVLKKITLGITLHVGDYLVGLEPQKQRVISXLNVGSDDTVHMVGIHGIGGIGKTTLALAVFNLIAHQFEGSCFLENVRENSEKHGLPFLQKILLSKVVGKKIELDGDRQGISMIQQRFRQKKFLLVLDDVNELEQLQAIAGKSNWFGLGSRVIITTRNQRLLTLHGVEHTYEVKELNNKDAFELVRWNAFKNEKTDRXXXXXXHVLERAVAYASGLPLALEVI 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme71768g00001 235 PRINTS Disease resistance protein signature 54 69 - -
Trme71768g00001 235 PRINTS Disease resistance protein signature 225 235 - -
Trme71768g00001 235 PRINTS Disease resistance protein signature 129 143 - -
Trme71768g00001 235 Gene3D - 16 182 IPR027417 -
Trme71768g00001 235 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 235 IPR044974 GO:0006952
Trme71768g00001 235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 235 IPR027417 -
Trme71768g00001 235 Pfam NB-ARC domain 36 235 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme71768g00001 Trme-Chr71768 29 734 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme71768g00001 3 189 WRKY Transcription Factor Family AT4G12020 33.684 9.91e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme71768g00001 - - mtr:120575853 305.834