Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme71760g00001 ATGCAGCCACATCCTCACGGAGATGGAGATGGTGATAAAAGTGTTTGTGTCATTCCAATAGTGGGAATAGGAGGATTAGGGAAGACCACACTTGCGAAGTTAGTGTTCAATGATAAGAGAATGAATCAAATTTTCCAATTGAAGATGTGGGTTTGTGTCTCTGATGATTTTGACATCAGGAAGATAATCATTAAAATCATCAACTCTGCCACTGCTTCTTTTTCTACTTCATCTTCCGCTCCATCAAGTGGTCTTGCTCACCAAGAAAACATGAACAACTTAGATATTGTGCAACTAGTAAGTCGTCTGAGACAAAAACTTTATGGTCAAAAGTTTTTAGTCGTGTTAGATGATGTATGGAATGAGGATCGTGCAAAGTGGCTTGAATTGAAAGATTTGATAAAAGTTGGTGCATCAGGAAGTAAAATTATGGTAACAACACGCAGTCAATCAATTGCTTCGATGATGGGTGATGTTCCCTCGTATGTTTTGGAAAGTCTTTCTCTAGAGGATTGTTTATCTCTATTTCTCAAATGGGCATTCAAGGAAGGTGATGAAAAAAAATATCCAAATCTAGTGGAGATCGGAAAAGAAATTGTGAAAAAATGCCAAGGGGTTCCACTAGCCGTAAGAACATTAGGAAGTTCTCTCTTCACAAACTTTGATATAA 670 0.3761 MQPHPHGDGDGDKSVCVIPIVGIGGLGKTTLAKLVFNDKRMNQIFQLKMWVCVSDDFDIRKIIIKIINSATASFSTSSSAPSSGLAHQENMNNLDIVQLVSRLRQKLYGQKFLVVLDDVWNEDRAKWLELKDLIKVGASGSKIMVTTRSQSIASMMGDVPSYVLESLSLEDCLSLFLKWAFKEGDEKKYPNLVEIGKEIVKKCQGVPLAVRTLGSSLFTNFDI 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme71760g00001 223 PRINTS Disease resistance protein signature 106 120 - -
Trme71760g00001 223 PRINTS Disease resistance protein signature 17 32 - -
Trme71760g00001 223 PRINTS Disease resistance protein signature 203 217 - -
Trme71760g00001 223 Pfam NB-ARC domain 13 217 IPR002182 GO:0043531
Trme71760g00001 223 Gene3D - 166 222 IPR042197 -
Trme71760g00001 223 Gene3D - 7 160 IPR027417 -
Trme71760g00001 223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 219 IPR027417 -
Trme71760g00001 223 PANTHER DISEASE RESISTANCE PROTEIN RP 16 217 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme71760g00001 Trme-Chr71760 123 792 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme71760g00001 20 217 WRKY Transcription Factor Family AT5G45050 28.500 3.24e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme71760g00001 - - gmx:100812584 335.109