Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme71755g00001 ATGGTAACATTGTTGACACTGTGGATACTCTCCAAGAGGAGGGTCAATCCAAGAGGAGATTCTGATAAGATTGAACTCGAATCAATTTCTCCGTACTCGAACAGCGGCGTTCATCCTGAGGTTGACAGAGAGGCTAGCCTAGTGGTATTGTTCCCCAACAAAAACAATGATACCAAGGATCTTTGCATGTTAGAGATCATAAAAGCTACTGAAAATTTCAGTCAGGCAAATATAGTAGGATGTGGCGGTTTCGGTTTGGTTTATAAAGCAACCTTTCAAAATGGAACTAAGCTAGCCATCAAGAAACTTTCAGGAGATTTAGGCCTTATGGAAAGGGAATTTAAAGCTGAAGTTGAGGCTTTGTCAACAGCACAACATGAGAATCTGGTAGCATTGCAAGGCTACTGCGTGCATGATGGTTATCGGCTACTCATATATAATTACATGGAGAATGGAAGTCTCGATTACTGGTTGCACGAAAAGCCTGACGGTTCGGCTCAACTCGATTGGCCGACTCGTTTGAAGATTGCACAAGGAGCAAGTTGTGGTTTGGCCTATTTGCATATGACATGCGAACCACACATCGTGCACCGCGATATAAAATCAAGCAATATACTCCTTAACGAGAAGTTTGAGGCACATGTTGCTGATTTTGGGTTGTCGCGGTTGATTCTTCCGTATCAAACCCATGTTACAACTGAACTTGTAGGTACATTAGGTTACATTCCTCCAGAGTATGGACAAGCATGGGTGGCTACTCTAAGAGGCGA 770 0.4312 MVTLLTLWILSKRRVNPRGDSDKIELESISPYSNSGVHPEVDREASLVVLFPNKNNDTKDLCMLEIIKATENFSQANIVGCGGFGLVYKATFQNGTKLAIKKLSGDLGLMEREFKAEVEALSTAQHENLVALQGYCVHDGYRLLIYNYMENGSLDYWLHEKPDGSAQLDWPTRLKIAQGASCGLAYLHMTCEPHIVHRDIKSSNILLNEKFEAHVADFGLSRLILPYQTHVTTELVGTLGYIPPEYGQAWVATLRG 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme71755g00001 256 Pfam Protein kinase domain 74 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme71755g00001 256 FunFam Os07g0541700 protein 149 238 - -
Trme71755g00001 256 SUPERFAMILY Protein kinase-like (PK-like) 61 250 IPR011009 -
Trme71755g00001 256 Gene3D Transferase(Phosphotransferase) domain 1 149 254 - -
Trme71755g00001 256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Trme71755g00001 256 SMART serkin_6 73 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme71755g00001 256 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Trme71755g00001 256 FunFam Leucine-rich repeat receptor protein kinase MSP1 40 148 - -
Trme71755g00001 256 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 248 - -
Trme71755g00001 256 ProSiteProfiles Protein kinase domain profile. 73 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme71755g00001 256 Gene3D Phosphorylase Kinase; domain 1 39 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme71755g00001 Trme-Chr71755 45 814 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme71755g00001 65 256 Receptor kinase-like Gene Family AT5G07280 54.167 3.52e-62 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Trme71755g00001 Pkinase 1.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme71755g00001 - - gmx:100807989 475.707