Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme71740g00001 ATGGATCTTTGGAAGCCTTTGAATGATTTAGTAGAGATCGCAAGCAGGACTAAATCTTTCAAGTCTAATAATACGCAACGGTCTGATGCCAAACCAGAACATGTTCAAGTAAACGAGAGTGACTCTCTAGTGCAGAAAATCAAAAATAAGGAAAATAAACGCAAGGCAAAAGTTGAAGATGAAAAGAGTAGTAGCCCTTTTCCAGTTTGTTCGGATACAGCAAAACCAAATAAATTGCGCAGAGTACGCAGGAAAAAGGAACCATTTGGAGAATCAGGCATATCTCCCCAAGCTGTGGTGGATTCTACCAGCAATAAACACTTTAAGAGTGGTCCAATTTGGTTATCCTTAGTAGCTACTGAAAACCAGGAAGGAGAAGCACCCTTGCCAAATATTCCTGCAATCTATTTGAGAATAAA 419 0.3938 MDLWKPLNDLVEIASRTKSFKSNNTQRSDAKPEHVQVNESDSLVQKIKNKENKRKAKVEDEKSSSPFPVCSDTAKPNKLRRVRRKKEPFGESGISPQAVVDSTSNKHFKSGPIWLSLVATENQEGEAPLPNIPAIYLRI 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme71740g00001 139 MobiDBLite consensus disorder prediction 44 62 - -
Trme71740g00001 139 MobiDBLite consensus disorder prediction 18 106 - -
Trme71740g00001 139 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 2 139 IPR044807 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme71740g00001 Trme-Chr71740 149 698 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme71740g00001 1 139 C3H Transcription Factor Family AT2G30580 40.714 1.69e-19 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme71740g00001 K16277 - gmx:100815540 203.756