Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7169g00001 ATGTGCCAAGTTTCAATTGAGAAGCCAGAGTTTAAGGAATTGACCACATCAGAGATTGGAAAGCTTGTATCTGTGACAGGAGTTGTAACATGGACAAGTGAAGTTCGACCCAAGCTTCTCAATGGAAGTTTGAAATGCCTAGAATGTGGTGAGGTTATAAACAATGTTGAACAACAATTCAACCAACAATATGTCTATAAGCAACCTGTAACATCCGAACAAAGTGGGCACTGCTGCGCGAAGAGAGCAAATTTACTGATTGGTAAAAGGTCAGAATGCAGGAGACATCCAAAGAGATACCTGCAGGCTGTTTGCCTAGGTGCAGTAGTTGTTATAGATCTCCCCTATCATCTAGTTTTTATTGCAAACTCTGTTCAGGCACGGGAACTGGATGAAGTTCAACAAATGAGGAACACTCAAGAATCAAGATTTCTTTGTCAAACTTGTCCAGAG 453 0.4106 MCQVSIEKPEFKELTTSEIGKLVSVTGVVTWTSEVRPKLLNGSLKCLECGEVINNVEQQFNQQYVYKQPVTSEQSGHCCAKRANLLIGKRSECRRHPKRYLQAVCLGAVVVIDLPYHLVFIANSVQARELDEVQQMRNTQESRFLCQTCPE 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7169g00001 151 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 8 98 IPR031327 GO:0003677|GO:0005524|GO:0032508
Trme7169g00001 151 SUPERFAMILY Nucleic acid-binding proteins 11 70 IPR012340 -
Trme7169g00001 151 Pfam MCM OB domain 11 103 IPR033762 -
Trme7169g00001 151 Gene3D - 10 143 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7169g00001 11 69 Core DNA Replication Machinery Family AT5G44635 71.186 4.20e-20 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7169g00001 K02542 - mnt:112091254 83.5741