Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme71692g00001 ATGATATTTAGAGGGACCGACACAGTGGCTGTTTTGATAGAATGGATACTAGCGAGGTTGGTGCTTCATCCAGACGTGCAAAGGAAGGTACAAAAGGAGCTTGATGAGGTGGCAAGCGGAGACGCACGTGTGTTTACGGAGGAGGATGTGGCGGCAACGGTTTATTTACCTGCGGTGATTAAGGAGGTTTTAAGTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNACAGCCATGGTAAACATGTGGGCCATAGCTAGGGACCCAAATGTGTGGAGGGACCCACTTGAATTTAATCCTGATAGGTTTGTGAACGAAGGGGCGGAATTTTCAGTTCTTGGATCGGATCTAAGGTTAGCTCCGTTTGGGTCGGGTAGGAGAAGTTGTCCGGGGAAGAATTTGGGTTTAACTACGGTAACTTTTTGGGTGGCTAAGCTTTTGCAAGAGTTTGAATGGCTACCGTTGGATGATGGGAACGGCGTTGATTTAACGGAGGTGCTAAGGCTTTCGTGTGAAATGGC 575 0.407 MIFRGTDTVAVLIEWILARLVLHPDVQRKVQKELDEVASGDARVFTEEDVAATVYLPAVIKEVLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAMVNMWAIARDPNVWRDPLEFNPDRFVNEGAEFSVLGSDLRLAPFGSGRRSCPGKNLGLTTVTFWVAKLLQEFEWLPLDDGNGVDLTEVLRLSCEMA 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme71692g00001 192 Coils Coil 64 65 - -
Trme71692g00001 192 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme71692g00001 192 PRINTS E-class P450 group I signature 99 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme71692g00001 192 PRINTS E-class P450 group I signature 147 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme71692g00001 192 PRINTS E-class P450 group I signature 137 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme71692g00001 192 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 140 149 IPR017972 GO:0005506|GO:0016705
Trme71692g00001 192 PANTHER CYTOCHROME P450 78A7-RELATED 1 192 - -
Trme71692g00001 192 Gene3D Cytochrome P450 1 66 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme71692g00001 192 PRINTS P450 superfamily signature 147 158 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme71692g00001 192 PRINTS P450 superfamily signature 138 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme71692g00001 192 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme71692g00001 192 PRINTS P450 superfamily signature 58 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme71692g00001 192 Gene3D Cytochrome P450 92 191 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme71692g00001 192 SUPERFAMILY Cytochrome P450 1 182 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme71692g00001 192 Pfam Cytochrome P450 97 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme71692g00001 192 Pfam Cytochrome P450 1 64 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme71692g00001 Trme-Chr71692 1 575 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme71692g00001 1 192 Cytochrome P450 AT2G46660 62.371 1.25e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme71692g00001 K20619 - gmx:100798388 249.98